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scnpilot_cont_500_p_scaffold_18_51

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 42592..43125

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RL6_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 177.0
  • Bit_score: 314
  • Evalue 7.10e-83
  • rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novo similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 177.0
  • Bit_score: 316
  • Evalue 2.00e-83
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 177.0
  • Bit_score: 314
  • Evalue 2.00e-83

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAGCCGCATTGGTAAGAAGCCTGTTGCCATTCCGGCGGGCGTCTCGGCGAATATCGCCGACGGCGTGCTGTCCGTGAAGGGCCCCAAGGGCGCGCTGACGCTGAACCTGCGTGACGAAATCAGCTATGCTGTCGACGGCGACACCATCCTGGTGAAGCCCGCCAACGACACGAAGCAGGCTCGCGCGTTCTGGGGGATGCAGCGCACGCTCGTCTCGAACCTGATCACCGGTGTGACCGAAGGCTACACCAAGACCCTGCAGATCACCGGTGTGGGCTATCGCGCCACCGCTCAGGGCAAGGTGCTCAAGCTTCAGCTGGGCTATAGCCATGACGTCAACTTCGACGTTCCCGAAGGCATCGAAATCAAGACCCCGGACAACACCACGGTCCTGATTTCCGGTATCGACAAGCAGAAGGTGGGTCAGGTTGCGGCCGAGATCCGTCGCTGGCGTAAGCCCGAGCCCTATAAGGGCAAGGGTATCAAGTACGCTGGCGAGTTCATCTTCCGCAAGGAAGGGAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRIGKKPVAIPAGVSANIADGVLSVKGPKGALTLNLRDEISYAVDGDTILVKPANDTKQARAFWGMQRTLVSNLITGVTEGYTKTLQITGVGYRATAQGKVLKLQLGYSHDVNFDVPEGIEIKTPDNTTVLISGIDKQKVGQVAAEIRRWRKPEPYKGKGIKYAGEFIFRKEGKKK*