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scnpilot_cont_500_p_scaffold_18_53

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 43478..44194

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B38573 similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 242.0
  • Bit_score: 353
  • Evalue 1.40e-94
  • rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 242.0
  • Bit_score: 362
  • Evalue 5.60e-97
rpsE; 30S ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 236.0
  • Bit_score: 342
  • Evalue 7.00e-92

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGGCTGACGAAACCAACCTTGAAACCGGTGCCGTTGTCGGCGCCGAAGCCGCTCCCGAGGGCAACGAGCGTGAAGGTCGTCGTGGTCGTGGTCGCGGACGTGATGGCGAGCGTGGCGAAGGCCGCGGTCGTGGTCGCCGCGATGACCGTCGCGGCAAGAATGACGAGGAACAGGGTGAAGAGCTGATTGAAAAGCTCGTTCACATCAACCGCGTCAGCAAGACCGTGAAGGGCGGTAAGCGCTTTGGCTTTGCTGCTCTCGTCGTGGTCGGCGATGGCAAGGGCCGCGTTGGCTTTGGTCATGGCAAGGCTCGCGAAGTGCCTGAAGCCATCACCAAGGCGACTGCCTCGGCCAAGAAGAAGATGGTTCGCGTTCCCCTCAAGGAAGCGCGCACCCTTCACCACGACGGTAAGGGCCATTTCGGCGCCGGCAAGGTGAGCGTGCGTTCGGCCCCGGCCGGTACGGGCATCATCGCTGGCGGCCCGATGCGCGCTGTCTTCGAAAGCCTGGGCGTTCATGACGTGGTGACCAAGTCGGTCGGCACCTCGAACCCTTACAACATGATCCGCGCCACTTTCGACGCTCTGACCAACCAGTCGAGCCCGAAGTCGGTGGCGCAGCGTCGCGGCAAGAAGGTCACCGACCTGCTGAACCGCGATGGGCATCACCACTCTGAGGCGCAGCTTGAAGCTGCTGCCGCTGCGATTACGGAGTAA
PROTEIN sequence
Length: 239
MADETNLETGAVVGAEAAPEGNEREGRRGRGRGRDGERGEGRGRGRRDDRRGKNDEEQGEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAITKATASAKKKMVRVPLKEARTLHHDGKGHFGAGKVSVRSAPAGTGIIAGGPMRAVFESLGVHDVVTKSVGTSNPYNMIRATFDALTNQSSPKSVAQRRGKKVTDLLNRDGHHHSEAQLEAAAAAITE*