ggKbase home page

scnpilot_cont_500_p_scaffold_18_58

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 47843..48211

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RS13_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 122.0
  • Bit_score: 237
  • Evalue 7.60e-60
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 122.0
  • Bit_score: 237
  • Evalue 8.10e-60
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 122.0
  • Bit_score: 235
  • Evalue 6.20e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGGCTCGTATTGCCGGGGTTAATATCCCCACCAACAAGCGCGTTATCATCGCGCTGACTTACATTCATGGTATCGGCTCGTTCAAGGCCAAGCAGATCGCCGACAAGCTGGGCATCGACCATAGCCGTCGCGTGCAGGATCTGTCGGACGCTGAAGTCCTGCACATCCGTGAAACCATTGACGCCGAACACACCGTGGAAGGCGATCTTCGTCGCGAAACCGCGATGAACATCAAGCGTCTGATGGATCTGGCCTGCTATCGCGGCCTGCGTCACCGTAAGGGCCTGCCCGTTCGCGGTCAGCGCACCCACACCAACGCCCGCACCCGCAAGGGTAAGGCCAAGCCCATCGCTGGTAAGAAGAAGTAA
PROTEIN sequence
Length: 123
VARIAGVNIPTNKRVIIALTYIHGIGSFKAKQIADKLGIDHSRRVQDLSDAEVLHIRETIDAEHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGKKK*