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scnpilot_cont_500_p_scaffold_18_60

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 48768..49829

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 353.0
  • Bit_score: 651
  • Evalue 1.40e-184
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 354.0
  • Bit_score: 651
  • Evalue 5.20e-184
DNA-directed RNA polymerase subunit alpha n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RPOA_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 353.0
  • Bit_score: 651
  • Evalue 4.80e-184
  • rbh

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGACTGTCAACATCAAGAACTGGCAGGAACTGAAGAAGCCCAACAGCCTCGAAGTCAAGCCGGGGAACGACCCCAAGCGCCGCGCGACCTTCGTCGCCGAACCGCTGGAGCGCGGTTTCGGTCTGACGCTGGGCAATGCGCTGCGTCGCGTCCTGCTTTCTTCTCTGCAGGGCGCCGCGATCACCTCGATCAAGATCGAGAACGTGCTGCATGAGTTCAGCTCGCTGGCCGGTGTGCGTGAAGACGTTACCGACATCGTGCTGAACGTGAAGCAGATCGCGCTCAAGATGCAGGGCGAAGGTCCGAAGCGCTTGCAGCTCTCGGCCACCGGTCCGGGCGAAGTGCGCGCTGGCGATATTGCAGTGACGGGCGATATCGAGGTTATGAACAAGGACCTCGTGATTTGCCACCTCGACGAAGGTGCAACGCTGAACATGGAACTGACCGCAGACAGCGGCAAGGGCTATGTGCCGGCGGTGCAGAACCGTCCGATTGATGCACCGATTGGTCTCATTCCGGTCGACTCGCTTTACTCGCCGGTGCGTCAGGTCAGCTACAAGGTTGACAATGCGCGTATCGGTCAGGAACTGGACTATGACAAGCTGAGCCTTTCGGTGGAAACCGACGGCACGGTGGCTCCTGAAGACGCGGTGGCCTATGCTGCGCGCATTCTGCAGGACCAGCTGGCTCTGTTCGTCCATTTCGAGGATATCGCTCCGGTTGGCGCGGCTCCGATGATTGGCGGCATTGCTGCTGCTGCTCCGGAAGAGGGCGACACCAACCAGCTCAACCGCTACCTTCTCAAGAAGGTCGACGAGCTGGAACTGTCGGTCCGCTCGGCCAACTGTCTCAAGAACGACAACATCATCTACATCGGCGATCTGGTCCAGAAGACCGAAGCCGAGATGCTGCGCACGCCGAATTTCGGTCGCAAGTCGCTCAACGAGATCAAGGAAGTGCTCTCTTCGATGGGTCTGCGTCTGGGGATGGATATCCCCGGTTGGCCGCCTGAGAATATCGAGGAAATGGCCAAGAAGCTCGAACAGGAGCTGCTGGGCTAA
PROTEIN sequence
Length: 354
MTVNIKNWQELKKPNSLEVKPGNDPKRRATFVAEPLERGFGLTLGNALRRVLLSSLQGAAITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMQGEGPKRLQLSATGPGEVRAGDIAVTGDIEVMNKDLVICHLDEGATLNMELTADSGKGYVPAVQNRPIDAPIGLIPVDSLYSPVRQVSYKVDNARIGQELDYDKLSLSVETDGTVAPEDAVAYAARILQDQLALFVHFEDIAPVGAAPMIGGIAAAAPEEGDTNQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG*