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scnpilot_cont_500_p_scaffold_48_108

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(122231..122500)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A400 similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 81.0
  • Bit_score: 98
  • Evalue 4.00e-18
Uncharacterized protein {ECO:0000313|EMBL:GAO39504.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 80.0
  • Bit_score: 91
  • Evalue 8.90e-16
nuclease (SNase domain-containing protein) similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 82.0
  • Bit_score: 84
  • Evalue 1.30e-14

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
TTGATCTCCGGCTACGTCCCCCTCGCGCTGGTGCTGGTCAATGCGCGCACGGTCCACCTGTTTTGGCAGGACAAGCGCTATGCCCGCGAGGGGCACCGCCGCATCCCGGAATCCAGCCTGCTGATGATGGCCGCGATAGGCGGCACGCCCGGCGCGCTGGTCGCCCGGCAATGGTTTCGCCACAAAACCCGCAAGCAGCCGTTTTCGGCCTATTTGTGGTTGATCGCGGCGGCTCAGATCGGCCTGATCGTGTGGCTGGCGCGATCCTGA
PROTEIN sequence
Length: 90
LISGYVPLALVLVNARTVHLFWQDKRYAREGHRRIPESSLLMMAAIGGTPGALVARQWFRHKTRKQPFSAYLWLIAAAQIGLIVWLARS*