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scnpilot_cont_500_p_scaffold_48_143

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 161425..162003

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CMT9_SPHYA similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 195.0
  • Bit_score: 198
  • Evalue 6.10e-48
Uncharacterized protein {ECO:0000313|EMBL:AHE55565.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 195.0
  • Bit_score: 228
  • Evalue 1.00e-56
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 182.0
  • Bit_score: 144
  • Evalue 2.30e-32

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Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGAGGGCGATCCGCAGCATTCTGGCGGGTCTTTCGCCGCGCCTGACGGAGGGAGTTCCGCTGCCGCCGGACGACCGGGTGGTGAAAGCTTCCGCACTCGCGCTCGAGGATATTTATCGTCGCGAGGCGCCCCGGATGATCCGCGCCATGGCCAGATTGTCCTCCTCTCAGGATGCCGAAGACATCGTGCATGATAGTTTTGTCCAACTGGCCCGTGCCGGGTCAGACCGGACGATCGAGCAGCCGGAGGCCTATCTCAACCGGATCGCCTCCAATCTGCAATGCAATCGCGCGAAATCGGCCTTTGAACGCGCCCGTGCGCTGAGCACACCCGTCGAGGACGTCGTGCTGTCCGGACCTGATCCGACGGCCCAGCTTGAGGCACGCGACATGATCCACCGTATCCAGAACGCCCTGATGCGGTTAAGTCCCAAGACCCGTGACATATTTCTTTCCCACCGCGTCGATGGACTGAGCTATGGCGAGATAGCCGACGGCATGGGACTGAGCGTCAAGGGGATCGAGTGGCATATGACCAAGGCAATCGCGCATCTCGATCGCAGCCTGAGGACGCGATAA
PROTEIN sequence
Length: 193
MRAIRSILAGLSPRLTEGVPLPPDDRVVKASALALEDIYRREAPRMIRAMARLSSSQDAEDIVHDSFVQLARAGSDRTIEQPEAYLNRIASNLQCNRAKSAFERARALSTPVEDVVLSGPDPTAQLEARDMIHRIQNALMRLSPKTRDIFLSHRVDGLSYGEIADGMGLSVKGIEWHMTKAIAHLDRSLRTR*