ggKbase home page
This organism can only be binned in the context of its binning project GWE2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

scnpilot_cont_500_p_scaffold_57_4

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(2901..3752)

Top 3 Functional Annotations

Value Algorithm Source
3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC:1.13.11.15) similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 281.0
  • Bit_score: 341
  • Evalue 1.90e-91
3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase {ECO:0000313|EMBL:CKH79425.1}; EC=1.13.11.15 {ECO:0000313|EMBL:CKH79425.1};; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 281.0
  • Bit_score: 341
  • Evalue 9.20e-91
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI0003690EB0 similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 281.0
  • Bit_score: 366
  • Evalue 3.30e-98
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Achromobacter xylosoxidans → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGGGCAAAATTGTTTACGCGGCCAAGATCACTCACATCCCGCGCATGATCCTGTCGGAGCAGCCCGGGCCGCTGCATGGGTGTCGCGACGACGCCGTCGAGGGGTTGCGCGAGGTTGGGCGCCGGATTCTCGATGCGGGGGCGGAAACGCTGATTGTGCTTGATACGCACTGGCTCAGCAATGCGGGCTATCATGTCAACTGTGCGTCACGCTTTGATGGCGTCTATTCGAGCAGTGAGTTTCCGACTCAGTTGAAGGATCTGGAATATCACGCGCCCGGTGATCCTGAACTGGGCCATGCCATCGCGGCTGCTGCCTCGGCCGCCGGGGTGCCTACCTTTGCGCATGAAAACAAGGCGATGTGGCTTGAATATGGCACGCTTGTGCCTTTGCACTTTATGAATACCGGCGACAGATTGAAGGTCGTCTCCATGTCGGGCTGGCTGGCCTGGGCGTCCATCGACGAGAGCCGGAAGGTCGGGGCCGCCTTGCGCGCCGCCATCGAGGCTTCGGATCGCAAGGTGGCGGTGCTGGCCAGTGGTTCGCTGTCGCACCGCATTCACGACAATGCGGTCGTGCTCGATCACCCCTATGAGATCAGTGACGAATTCAACCGCCAGTGCGATCTGCGCGCGCTTGATCTGTGGACGCAGGGGCGCTGGAAGGAGTTTGCGGGGATGCTGCCGACCTATGCGCGCGCTTGCAGCGGCGAGGGTTGGATGCATGATACGGCGATGCTGATGGGGGCGCTGGGCTGGGATGCCTATCAAGGTTGCGCCGAGGTGATCGTCCCCTATTTCATTGCTTCGGGCACCGGGCAGGTGATTGCCCAGTTCCCGATCGCGGCCTGA
PROTEIN sequence
Length: 284
MGKIVYAAKITHIPRMILSEQPGPLHGCRDDAVEGLREVGRRILDAGAETLIVLDTHWLSNAGYHVNCASRFDGVYSSSEFPTQLKDLEYHAPGDPELGHAIAAAASAAGVPTFAHENKAMWLEYGTLVPLHFMNTGDRLKVVSMSGWLAWASIDESRKVGAALRAAIEASDRKVAVLASGSLSHRIHDNAVVLDHPYEISDEFNRQCDLRALDLWTQGRWKEFAGMLPTYARACSGEGWMHDTAMLMGALGWDAYQGCAEVIVPYFIASGTGQVIAQFPIAA*