ggKbase home page

scnpilot_cont_500_p_scaffold_57_100

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(105537..107105)

Top 3 Functional Annotations

Value Algorithm Source
AMP-binding protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IB61_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 497.0
  • Bit_score: 747
  • Evalue 9.60e-213
  • rbh
Scaffold3, whole genome shotgun sequence {ECO:0000313|EMBL:KIS33209.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 503.0
  • Bit_score: 749
  • Evalue 3.50e-213
AMP-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 502.0
  • Bit_score: 734
  • Evalue 1.80e-209

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1569
ATGGTACAGCACAGTATTCCGCTCGAAACCGCTCCTTTGCCGCTGGACCATCTGGCGATCCGGGGCAGGGATGAGGCTCCGGCTCTCGTGCTGCGCGAAGGTGTTCTTAGCTATAAGGATTTAACAGAGCGTGTCGGTGCGATGGCGGCATGGCTGGCGGCGCGTGCGGAGCCGGGCGCGCGCATCGCCACATGGGCGGCCAAGGGCGAACTGACTTGCCTGATGCCTCTGGCGGCGGCGCGGGCGGGGATGGTGCATGTGCCGATCAATCCGCTGCTCAAGCGGGCGCAGGTGGCGCATATTCTGGCCGACAGCGGGGCGGCGCTGCTGATCGCCACGCCCGCGCGGCTGGCTTCGCTGGAGGCGGCCGATGCGGATTGCCCGACCATGGGCGAGGGCGAGGCGATTGAGGAGAGCCGTGGTTTCGATCCGCTGGGGCCTTCGCAGGGCGATCCCGATGATCTGGCCGCGATCCTTTATACCAGTGGTTCGACGGGGCGACCCAAGGGGGTGATGCTGTCCCACGCCAATATGTGGCTGGGGGCGCAGAGTGTGGCGGCCTATCTGGAGCTGCGCGAGGATGACCGGGCGCTCGCCGTGCTGCCTTTGAGTTTCGATTATGGGCAGAACCAGTTGCTCTCGCACTGGTATGCCGGGGCCAGCGCGGTGCCGCTCGATTATCTGATGCCGCGCGATGTGGTGAAGGCCATCGATCGCCATGATGTGACCACGCTGGCCTGCGTCCCGCCGCTCTGGGTGCAATTGACCGAGCAGGAATGGCCCGCGCATGTGGCCGCCAAATTGCGGCGGCTGACCAACAGCGGGGGGGCGTTGACGGTCGATCTGGTGCACCGCCTGCGGGGGATATTTCCCGATGCGCGCCTGTTCGCCATGTATGGATTGACCGAGGCGTTTCGTTCGACCTTCCTCGATCCCGCGCTGATCGACGCAAATCCCACCAGCATGGGGCGCGCGATCCCTCATGCCGAAATCCTGGTGGTGCGCGATGATGGCGCCATCGCCGGGGATGATGAGGAAGGCGAGCTGGTCCATTGCGGCCCGCTGGTGGCCAAGGGCTATTGGCAGGATGAGGTGCGCACCGCAGAGCGCTATAAGCCCGCACCAGAAGCCAGCACCTATGGCGGCATGGCGGTGTGGAGCGGCGACAGGGTGCGGCGCGATGCGGCGGGCCTGCTTTATTTCGTGGGGCGGCGCGATGCGATGATCAAATCCGCGGGCAACCGCATCAGTCCCCAGGAGATCGAGGATGCCGCCGTCGCCACCGGATTGGTGGCCGAGGCGGTGGCGCTGGGCCTGCCCGATGATCGGCTGGGCCATGCGGTCTGTCTGGTGGTGCGCGCTGTGCCGGGCGTGCAAAACCCGGCCGAGGAATTGCCCCGAAGGTTGAAAGCCGATCTGCCCAATTTCATGCAGCCTTCGGTGATCCACTGGAAGGAGGCCATGCCCATCAGCCCCAATGGCAAATTGGACCGCACAGGATTGTATCAGGAAATGCTGGAATGGAAGATTGCCGTCGATCAGGCCACCTCGCGGGAGCGTGATGCATGA
PROTEIN sequence
Length: 523
MVQHSIPLETAPLPLDHLAIRGRDEAPALVLREGVLSYKDLTERVGAMAAWLAARAEPGARIATWAAKGELTCLMPLAAARAGMVHVPINPLLKRAQVAHILADSGAALLIATPARLASLEAADADCPTMGEGEAIEESRGFDPLGPSQGDPDDLAAILYTSGSTGRPKGVMLSHANMWLGAQSVAAYLELREDDRALAVLPLSFDYGQNQLLSHWYAGASAVPLDYLMPRDVVKAIDRHDVTTLACVPPLWVQLTEQEWPAHVAAKLRRLTNSGGALTVDLVHRLRGIFPDARLFAMYGLTEAFRSTFLDPALIDANPTSMGRAIPHAEILVVRDDGAIAGDDEEGELVHCGPLVAKGYWQDEVRTAERYKPAPEASTYGGMAVWSGDRVRRDAAGLLYFVGRRDAMIKSAGNRISPQEIEDAAVATGLVAEAVALGLPDDRLGHAVCLVVRAVPGVQNPAEELPRRLKADLPNFMQPSVIHWKEAMPISPNGKLDRTGLYQEMLEWKIAVDQATSRERDA*