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scnpilot_cont_500_p_scaffold_606

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_606_1
unknown

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2..70
DNA (69bp) protein (23aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_606_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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323..610
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00030FDECD
excinuclease ABC subunit C
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:ABS64485.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parviba
scnpilot_cont_500_p_scaffold_606_3
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(886..2379)
DNA (1494bp) protein (498aa)
Permease YjgP/YjgQ family protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU49_AMOA5 rbh
permease YjgP/YjgQ family protein
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:ACE05468.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophil
scnpilot_cont_500_p_scaffold_606_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2681..3400
DNA (720bp) protein (240aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU48_AMOA5 rbh
trmD; tRNA (guanine-N(1)-)-methyltransferase
scnpilot_cont_500_p_scaffold_606_5
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3381..4322
DNA (942bp) protein (314aa)
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU47_AMOA5 rbh
helix-turn-helix-domain containing protein
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ACE05466.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;"
scnpilot_cont_500_p_scaffold_606_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4574..8482
DNA (3909bp) protein (1303aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU46_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05465.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiatic
scnpilot_cont_500_p_scaffold_606_7
RBG_16_Gammaproteobacteria_37_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8983..9270)
DNA (288bp) protein (96aa)
excinuclease ABC subunit C Tax=RBG_16_Gammaproteobacteria_37_9_curated
Endonuclease id=2201931 bin=GWB2_CP_45_9 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
excinuclease ABC subunit C
scnpilot_cont_500_p_scaffold_606_8
unknown

Not on your lists

9646..12681
DNA (3036bp) protein (1012aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_606_9
unknown

Not on your lists

13086..16958
DNA (3873bp) protein (1291aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_606_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17033..17416)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU45_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05464.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiatic
scnpilot_cont_500_p_scaffold_606_11
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17614..19020)
DNA (1407bp) protein (469aa)
RNA methyltransferase, TrmA family n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU44_AMOA5 rbh
TrmA family RNA methyltransferase
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ACE05463.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophi
scnpilot_cont_500_p_scaffold_606_12
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19289..21790
DNA (2502bp) protein (834aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034AA785 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHM59015.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
hypothetical protein
scnpilot_cont_500_p_scaffold_606_13
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21852..22526)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU43_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05462.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiatic
scnpilot_cont_500_p_scaffold_606_14
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22689..22988
DNA (300bp) protein (100aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES17_AMOA5
hypothetical protein
scnpilot_cont_500_p_scaffold_606_15
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23000..24037
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES18_AMOA5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06020.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiatic
scnpilot_cont_500_p_scaffold_606_16
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24136..24786)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES19_AMOA5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06021.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiatic
scnpilot_cont_500_p_scaffold_606_17
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25035..25763)
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein Aasi_0624 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=Y624_AMOA5 rbh
hypothetical protein
Probable transcriptional regulatory protein Aasi_0624 {ECO:0000255|HAMAP-Rule:MF_00693}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophil
scnpilot_cont_500_p_scaffold_606_18
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26534..27136
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RECR_AMOA5 rbh
recR; recombination protein RecR
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus
scnpilot_cont_500_p_scaffold_606_19
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27609..28487
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES23_AMOA5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06025.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiatic
scnpilot_cont_500_p_scaffold_606_20
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28611..28967
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES24_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06026.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiatic
scnpilot_cont_500_p_scaffold_606_21
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29407..31614
DNA (2208bp) protein (736aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES25_AMOA5 rbh
hppA; membrane-bound proton-translocating pyrophosphatase
scnpilot_cont_500_p_scaffold_606_22
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31774..32424
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES26_AMOA5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06028.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiatic
scnpilot_cont_500_p_scaffold_606_23
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32656..32925
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=C3L3X5_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP21121.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiatic
Displaying 23 items

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