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scnpilot_cont_500_p_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 220 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_31_1
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(548..841)
DNA (294bp) protein (98aa)
Transposase IS3/IS911 family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXY0_9GAMM
transposase IS3/IS911 family protein
Transposase IS3 {ECO:0000313|EMBL:EPX97879.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
scnpilot_cont_500_p_scaffold_31_2
unknown

Not on your lists

1342..2250
DNA (909bp) protein (303aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_31_3
Pseudomonas sp., Proteobacteria, Bacteria

Not on your lists

comp(2946..5282)
DNA (2337bp) protein (779aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I0R5_PSEUO
Uncharacterized protein; TaxID=306 species="Bacteria; Proteobacteria.;" source="Pseudomonas sp.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_31_4
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6211..8127
DNA (1917bp) protein (639aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037F0B81 rbh
Outer membrane receptor {ECO:0000313|EMBL:KFC68142.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_31_5
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8115..8726
DNA (612bp) protein (204aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
hypothetical protein
hypothetical protein AradN_03003 id=1359345 bin=GWE1_T_denit_62_9 species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
scnpilot_cont_500_p_scaffold_31_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8723..11542
DNA (2820bp) protein (940aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000382D9A7
multi-sensor hybrid histidine kinase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
multi-sensor hybrid histidine kinase
scnpilot_cont_500_p_scaffold_31_7
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11630..12853
DNA (1224bp) protein (408aa)
hisitidine kinase n=1 Tax=Azoarcus toluclasticus RepID=UPI00036C2D98 rbh
response regulator
Response regulator {ECO:0000313|EMBL:AEY02607.1}; TaxID=511062 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Oceanimonas.;" source="Oceanimonas sp. (strain GK1
scnpilot_cont_500_p_scaffold_31_8
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12984..13940)
DNA (957bp) protein (319aa)
Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13IH7_BURXL rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABE36112.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
scnpilot_cont_500_p_scaffold_31_9
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14293..14946
DNA (654bp) protein (218aa)
Isochorismatase hydrolase n=2 Tax=Pseudogulbenkiania RepID=G2J570_PSEUL rbh
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:BAK77215.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbe
scnpilot_cont_500_p_scaffold_31_10
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15031..15321
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EN10_BRASB
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43348.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
scnpilot_cont_500_p_scaffold_31_11
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15318..17207
DNA (1890bp) protein (630aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Burkholderia sp. BT03 RepID=J2J4Z3_9BURK rbh
Amidohydrolase 3 {ECO:0000313|EMBL:EUC19964.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
amidohydrolase family protein
scnpilot_cont_500_p_scaffold_31_12
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17248..17655
DNA (408bp) protein (136aa)
DoxX family protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LR20_BURGS
doxX family protein
DoxX family protein {ECO:0000313|EMBL:KGC15435.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Bur
scnpilot_cont_500_p_scaffold_31_13
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17683..18588
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13IH5_BURXL rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE36114.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenov
scnpilot_cont_500_p_scaffold_31_14
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18585..20078
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZQG3_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKN01481.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX
alginate export family protein
scnpilot_cont_500_p_scaffold_31_15
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20115..20807
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035C1EB0
Uncharacterized protein {ECO:0000313|EMBL:AID31219.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huak
conserved membrane hypothetical protein
scnpilot_cont_500_p_scaffold_31_16
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21210..21821
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FD0D57
peptidase M17, leucyl aminopeptidase-like protein
Peptidase M17, leucyl aminopeptidase-like protein {ECO:0000313|EMBL:AIF45965.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" sour
scnpilot_cont_500_p_scaffold_31_17
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21894..22304
DNA (411bp) protein (137aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VUT1_9BURK
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:EJN10007.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Her
hypothetical protein
scnpilot_cont_500_p_scaffold_31_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22593..23315)
DNA (723bp) protein (241aa)
Sporulation domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE84_9GAMM
Sporulation domain-containing protein {ECO:0000313|EMBL:EIL97775.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
sporulation related protein
scnpilot_cont_500_p_scaffold_31_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23356..24093)
DNA (738bp) protein (246aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
Type III pantothenate kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBG3_9GAMM rbh
pantothenate kinase, type III
scnpilot_cont_500_p_scaffold_31_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24090..25079)
DNA (990bp) protein (330aa)
Biotin-(Acetyl-CoA-carboxylase) ligase BirA n=2 Tax=Rhodanobacter denitrificans RepID=I4WMI0_9GAMM rbh
birA, biotin-(acetyl-CoA-carboxylase) ligase
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin operon repressor {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_0097
scnpilot_cont_500_p_scaffold_31_21
unknown

Not on your lists

25278..25619
DNA (342bp) protein (114aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_31_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25771..27198)
DNA (1428bp) protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIP1_9GAMM
signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_31_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27146..27838)
DNA (693bp) protein (231aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVS2_9GAMM rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EIL92414.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadal
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_cont_500_p_scaffold_31_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27838..28161)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYX4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92415.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_cont_500_p_scaffold_31_25
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28255..29280)
DNA (1026bp) protein (342aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xantho
tRNA-dihydrouridine synthase A n=1 Tax=Dyella japonica RepID=UPI000304CE08 rbh
tRNA-dihydrouridine synthase A
scnpilot_cont_500_p_scaffold_31_26
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29480..30202)
DNA (723bp) protein (241aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZGM7_9XANT
HipA domain-containing protein
scnpilot_cont_500_p_scaffold_31_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30301..31281)
DNA (981bp) protein (327aa)
Transposase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKI8_9GAMM rbh
Transposase {ECO:0000313|EMBL:EIL87729.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;
transposase
scnpilot_cont_500_p_scaffold_31_28
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31309..31929)
DNA (621bp) protein (207aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZGM7_9XANT
hypothetical protein
scnpilot_cont_500_p_scaffold_31_29
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31926..32333)
DNA (408bp) protein (136aa)
Transcriptional regulator, XRE family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0H7_9GAMM
Helix-turn-helix protein Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
Helix-turn-helix protein
scnpilot_cont_500_p_scaffold_31_30
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32623..34275)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCX7_9GAMM rbh
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
Displaying items 1-30 of 220 in total

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