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scnpilot_cont_500_p_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 613 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_35_1
unknown

Not on your lists

49..414
DNA (366bp) protein (122aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_35_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

734..3787
DNA (3054bp) protein (1018aa)
TonB-dependent outer membrane receptor oar-like transmembrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y6_9GAMM rbh
TonB-dependent outer membrane receptor oar-like transmembrane protein {ECO:0000313|EMBL:EIL94177.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonada
TonB-dependent outer membrane receptor oar-like transmembrane protein
scnpilot_cont_500_p_scaffold_35_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4191..4706)
DNA (516bp) protein (172aa)
Ni,Fe-hydrogenase III small subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NNL7_9GAMM
Ni,Fe-hydrogenase III small subunit
Ni,Fe-hydrogenase III small subunit {ECO:0000313|EMBL:AGG89286.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
scnpilot_cont_500_p_scaffold_35_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4714..6258)
DNA (1545bp) protein (515aa)
NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDN4_9GAMM rbh
NADH-ubiquinone oxidoreductase chain 49kDa {ECO:0000313|EMBL:EIL97575.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
Ni,Fe-hydrogenase III large subunit
scnpilot_cont_500_p_scaffold_35_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6263..7717)
DNA (1455bp) protein (485aa)
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NEQ9_9GAMM rbh
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit {ECO:0000313|EMBL:AGG89284.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xant
scnpilot_cont_500_p_scaffold_35_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7719..8384)
DNA (666bp) protein (222aa)
Hydrogenase 4 membrane component n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB1_9GAMM rbh
hydrogenase 4 membrane component (E)
Hydrogenase 4 membrane component (E) {ECO:0000313|EMBL:AGG89283.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba
scnpilot_cont_500_p_scaffold_35_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8388..9341)
DNA (954bp) protein (318aa)
Respiratory-chain NADH dehydrogenase subunit 1 n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB2_9GAMM rbh
formate hydrogenlyase subunit 4
Formate hydrogenlyase subunit 4 {ECO:0000313|EMBL:AGG89282.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.
scnpilot_cont_500_p_scaffold_35_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9338..11353)
DNA (2016bp) protein (672aa)
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NNL2_9GAMM rbh
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit {ECO:0000313|EMBL:AGG89281.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xant
scnpilot_cont_500_p_scaffold_35_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11471..11686
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D94FB2
CopG family transcriptional regulator
CopG family transcriptional regulator {ECO:0000313|EMBL:AIF48875.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella j
scnpilot_cont_500_p_scaffold_35_10
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11922..12767)
DNA (846bp) protein (282aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN51743.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
Cytochrome c fa id=2495481 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
scnpilot_cont_500_p_scaffold_35_11

Not on your lists

13175..13546
DNA (372bp) protein (124aa)
Rhodanese-like protein n=1 Tax=uncultured bacterium A1Q1_fos_600 RepID=L7VVU4_9BACT
Rhodanese-like protein {ECO:0000313|EMBL:AGC71168.1}; TaxID=1256587 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_600.;"
rhodanese domain-containing protein
scnpilot_cont_500_p_scaffold_35_12
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13595..13945
DNA (351bp) protein (117aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
Alkylhydroperoxidase like protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URR6_PSEUP
alkylhydroperoxidase
scnpilot_cont_500_p_scaffold_35_13
Brenneria sp. EniD312, Brenneria, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14228..14626)
DNA (399bp) protein (133aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Polaromonas sp. CF318 RepID=J2KXU6_9BURK
Endoribonuclease L-PSP {ECO:0000313|EMBL:EHD22986.1}; TaxID=598467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Brenneria.;" source="Brenneria sp. Eni
putative translation initiation inhibitor, yjgF family
scnpilot_cont_500_p_scaffold_35_14
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14781..15683
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003753A16 rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEV27755.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain
scnpilot_cont_500_p_scaffold_35_15
Enterobacteriaceae bacterium 9_2_54FAA, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16008..16661)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Enterobacteriaceae bacterium 9_2_54FAA RepID=E5YF61_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EFV41419.2}; TaxID=469613 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacteriu
hypothetical protein
scnpilot_cont_500_p_scaffold_35_16
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16938..19154
DNA (2217bp) protein (739aa)
TonB-dependent receptor n=1 Tax=Azospirillum amazonense Y2 RepID=G1XWU7_9PROT rbh
TonB-dependent receptor {ECO:0000313|EMBL:EGY02259.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirill
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_35_17
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19212..20264
DNA (1053bp) protein (351aa)
Peptidase M61 domain-containing protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XWU6_9PROT
Peptidase M61 domain-containing protein {ECO:0000313|EMBL:EGY02258.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" sour
peptidase M61 domain-containing protein
scnpilot_cont_500_p_scaffold_35_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20442..20894)
DNA (453bp) protein (151aa)
Preprotein translocase subunit SecG n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI12_9GAMM
Preprotein translocase subunit SecG {ECO:0000313|EMBL:EIL99103.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
protein translocase subunit secG
scnpilot_cont_500_p_scaffold_35_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20913..21662)
DNA (750bp) protein (250aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG2_9GAMM rbh
scnpilot_cont_500_p_scaffold_35_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21773..22582
DNA (810bp) protein (270aa)
Oxidoreductase, short-chain dehydrogenase/reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN87_9GAMM rbh
Oxidoreductase, short-chain dehydrogenase/reductase {ECO:0000313|EMBL:EIL88678.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacte
dehydrogenase
scnpilot_cont_500_p_scaffold_35_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22793..23728)
DNA (936bp) protein (312aa)
flavonol synthase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C932E rbh
Dioxygenase, isopenicillin N synthase {ECO:0000313|EMBL:EIL88680.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
flavonol synthase
scnpilot_cont_500_p_scaffold_35_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23850..25196)
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=666685 species="Bacteri
Phosphoglucosamine mutase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXF8_9GAMM rbh
phosphoglucosamine mutase
scnpilot_cont_500_p_scaffold_35_23
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25276..26190)
DNA (915bp) protein (305aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
dihydropteroate synthase n=1 Tax=Dyella japonica RepID=UPI000304A180 rbh
dihydropteroate synthase
scnpilot_cont_500_p_scaffold_35_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26187..26753)
DNA (567bp) protein (189aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
Oligoribonuclease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN92_9GAMM rbh
oligoribonuclease
scnpilot_cont_500_p_scaffold_35_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26836..28272
DNA (1437bp) protein (479aa)
Exodeoxyribonuclease I {ECO:0000256|PIRNR:PIRNR000977}; EC=3.1.11.1 {ECO:0000256|PIRNR:PIRNR000977};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
exonuclease I (EC:3.1.11.1)
Exonuclease I n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN93_9GAMM rbh
scnpilot_cont_500_p_scaffold_35_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28303..28989
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN94_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL88685.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_cont_500_p_scaffold_35_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28956..30299)
DNA (1344bp) protein (448aa)
Major facilitator transporter (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIS7_9GAMM rbh
Major facilitator transporter {ECO:0000313|EMBL:EIL87118.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
MFS transporter
scnpilot_cont_500_p_scaffold_35_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30770..31516
DNA (747bp) protein (249aa)
Aquaporin Z n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI01_9GAMM rbh
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxyda
MIP family channel protein
scnpilot_cont_500_p_scaffold_35_29
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31566..31958)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E69476
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47984.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_cont_500_p_scaffold_35_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31962..32921)
DNA (960bp) protein (320aa)
Elongation factor P--(R)-beta-lysine ligase {ECO:0000256|SAAS:SAAS00088906}; EC=6.3.1.- {ECO:0000256|SAAS:SAAS00088909};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomo
Lysyl-tRNA synthetase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIS5_9GAMM rbh
lysyl-tRNA synthetase-like protein GenX
Displaying items 1-30 of 613 in total

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