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scnpilot_cont_500_p_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 230 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_47_1
unknown

Not on your lists

3..599
DNA (597bp) protein (199aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_47_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(409..1965)
DNA (1557bp) protein (519aa)
Signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYK5_9GAMM rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:EIL92296.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_47_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1997..2443)
DNA (447bp) protein (149aa)
Two-component system regulatory protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYK4_9GAMM
Two-component system regulatory protein {ECO:0000313|EMBL:EIL92295.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
chemotaxis protein CheY
scnpilot_cont_500_p_scaffold_47_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2440..4206)
DNA (1767bp) protein (589aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Putative two-component sensor histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYK3_9GAMM rbh
PAS domain S-box
scnpilot_cont_500_p_scaffold_47_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4353..6689)
DNA (2337bp) protein (779aa)
Alpha-1,2-mannosidase family protein (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4WB81_9GAMM rbh
Alpha-1,2-mannosidase family protein {ECO:0000313|EMBL:EIL96722.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba
alpha-1,2-mannosidase, putative
scnpilot_cont_500_p_scaffold_47_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6834..7892
DNA (1059bp) protein (353aa)
Transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7J7_9GAMM rbh
transcriptional regulator; K02529 LacI family transcriptional regulator Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
transcriptional regulator
scnpilot_cont_500_p_scaffold_47_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7918..9240
DNA (1323bp) protein (441aa)
L-fucose:H+ symporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK3_9GAMM rbh
Major facilitator transporter {ECO:0000313|EMBL:KGI78133.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrim
L-fucose:H+ symporter permease
scnpilot_cont_500_p_scaffold_47_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9250..10227
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030333FC rbh
fructokinase
Fructokinase {ECO:0000313|EMBL:AHX14568.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_cont_500_p_scaffold_47_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10224..11471
DNA (1248bp) protein (416aa)
D-mannose isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYJ8_9GAMM rbh
D-mannose isomerase {ECO:0000313|EMBL:EIL92289.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spath
N-acyl-D-glucosamine 2-epimerase
scnpilot_cont_500_p_scaffold_47_10
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11673..14669)
DNA (2997bp) protein (999aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003122502 rbh
TonB-dependent receptor {ECO:0000313|EMBL:AHX13233.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_47_11
unknown

Not on your lists

14932..15561
DNA (630bp) protein (210aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_47_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15416..17872)
DNA (2457bp) protein (819aa)
Alpha-mannosidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7V2_9GAMM rbh
Alpha-mannosidase {ECO:0000313|EMBL:EIL95543.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115
alpha-mannosidase
scnpilot_cont_500_p_scaffold_47_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17911..19374)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7V1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95542.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
Tat pathway signal protein rbh
scnpilot_cont_500_p_scaffold_47_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19371..21989)
DNA (2619bp) protein (873aa)
Glucan 1,4-beta-glucosidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7V0_9GAMM rbh
Glucan 1,4-beta-glucosidase {ECO:0000313|EMBL:EIL95541.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
glycoside hydrolase family 3
scnpilot_cont_500_p_scaffold_47_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21986..24712)
DNA (2727bp) protein (909aa)
Beta-mannosidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7U9_9GAMM rbh
Beta-mannosidase {ECO:0000313|EMBL:EIL95540.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.
beta-mannosidase
scnpilot_cont_500_p_scaffold_47_16
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25204..27348)
DNA (2145bp) protein (715aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q080_CATAD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU75573.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
scnpilot_cont_500_p_scaffold_47_17
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27556..30561)
DNA (3006bp) protein (1002aa)
Putative TonB-dependent transporter n=1 Tax=Xanthomonas fuscans subsp. fuscans RepID=U4M725_9XANT
putative TonB-dependent transporter
Putative TonB-dependent transporter {ECO:0000313|EMBL:CDF61158.1}; TaxID=366649 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xantho
scnpilot_cont_500_p_scaffold_47_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(30713..32002)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E77F0 rbh
Sugar phosphate permease {ECO:0000313|EMBL:CDM66676.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hexuronate transporter
scnpilot_cont_500_p_scaffold_47_19
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32002..33156)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D8747 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00228.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
scnpilot_cont_500_p_scaffold_47_20
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33160..34434)
DNA (1275bp) protein (425aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WAH2_ACTMD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00229.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
scnpilot_cont_500_p_scaffold_47_21
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34431..35420)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037AC893 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00230.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
scnpilot_cont_500_p_scaffold_47_22
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35521..36306
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379E0EB rbh
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACU35437.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema miru
scnpilot_cont_500_p_scaffold_47_23
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36406..37236
DNA (831bp) protein (277aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CEL14751.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CEL14751.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangi
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036031CD rbh
hypothetical protein
scnpilot_cont_500_p_scaffold_47_24
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37233..38732
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363173F rbh
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ACU35435.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 2
scnpilot_cont_500_p_scaffold_47_25
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39106..39363
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031B0C78
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47168.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_cont_500_p_scaffold_47_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39602..41416)
DNA (1815bp) protein (605aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1P1_9GAMM rbh
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EIL93382.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
ATP-dependent DNA helicase RecQ
scnpilot_cont_500_p_scaffold_47_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42311..43966)
DNA (1656bp) protein (552aa)
amino acid transporter n=1 Tax=Dyella japonica RepID=UPI0002E350BE rbh
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AHX12079.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;
scnpilot_cont_500_p_scaffold_47_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44146..45528)
DNA (1383bp) protein (461aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase {ECO:0000313|EMBL:AGG87811.1}; EC=4.3.1.17 {ECO:0000313|EMBL:AGG87811.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
L-serine dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT79_9GAMM rbh
scnpilot_cont_500_p_scaffold_47_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45605..45841
DNA (237bp) protein (79aa)
Glutaredoxin-like domain (DUF836) n=1 Tax=Rhodanobacter denitrificans RepID=M4ND81_9GAMM
Glutaredoxin-like domain (DUF836)
Glutaredoxin-like domain (DUF836) {ECO:0000313|EMBL:AGG87812.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
scnpilot_cont_500_p_scaffold_47_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45884..46441)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDL4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97555.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
Displaying items 1-30 of 230 in total

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