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scnpilot_cont_500_p_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 400 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_60_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..200
DNA (198bp) protein (66aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYJ6_FRAAD
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacte
scnpilot_cont_500_p_scaffold_60_2
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


617..928
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYK2_FRAAD
30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica
scnpilot_cont_500_p_scaffold_60_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


949..1590
DNA (642bp) protein (214aa)
50S ribosomal protein L3 n=1 Tax=Dyella japonica RepID=UPI00031AF103 rbh
50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyel
scnpilot_cont_500_p_scaffold_60_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1602..2204
DNA (603bp) protein (201aa)
50S ribosomal protein L4 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDR7_9GAMM rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
rplD; 50S ribosomal protein L4
scnpilot_cont_500_p_scaffold_60_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2201..2494
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VM73_9GAMM
ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
scnpilot_cont_500_p_scaffold_60_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2513..3334
DNA (822bp) protein (274aa)
50S ribosomal protein L2 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL66_9GAMM rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
50S ribosomal protein L2
scnpilot_cont_500_p_scaffold_60_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3347..3619
DNA (273bp) protein (91aa)
30S ribosomal protein S19 n=2 Tax=Rhodanobacter RepID=I4VM75_9GAMM
SSU ribosomal protein S19P
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
scnpilot_cont_500_p_scaffold_60_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3619..3954
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Dyella ginsengisoli RepID=UPI00034AB9BD
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dye
scnpilot_cont_500_p_scaffold_60_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3968..4741
DNA (774bp) protein (258aa)
30S ribosomal protein S3 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL63_9GAMM rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
SSU ribosomal protein S3P
scnpilot_cont_500_p_scaffold_60_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4753..5166
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ58_9GAMM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
LSU ribosomal protein L16P
scnpilot_cont_500_p_scaffold_60_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5168..5353
DNA (186bp) protein (62aa)
50S ribosomal protein L29 n=1 Tax=Dyella ginsengisoli RepID=UPI00034978A2
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
scnpilot_cont_500_p_scaffold_60_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5366..5626
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=1 Tax=Dyella ginsengisoli RepID=UPI0003456F48
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
30S ribosomal protein S17
scnpilot_cont_500_p_scaffold_60_13
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5642..6010
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=3 Tax=Rhodanobacter RepID=I4WKS3_9GAMM
LSU ribosomal protein L14P
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dye
scnpilot_cont_500_p_scaffold_60_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6025..6339
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Rhodanobacter denitrificans RepID=I4WKS4_9GAMM
ribosomal protein L24, bacterial/organelle
ribosomal protein L24, bacterial/organelle Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_cont_500_p_scaffold_60_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6351..6890
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Dyella ginsengisoli RepID=UPI00034CE126 rbh
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
scnpilot_cont_500_p_scaffold_60_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6925..7230
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VM84_9GAMM
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
ribosomal protein S14
scnpilot_cont_500_p_scaffold_60_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7449..7844
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Dyella ginsengisoli RepID=UPI00034598EE
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
ribosomal protein S8
scnpilot_cont_500_p_scaffold_60_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7855..8382
DNA (528bp) protein (176aa)
50S ribosomal protein L6 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK3_9GAMM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhod
LSU ribosomal protein L6P
scnpilot_cont_500_p_scaffold_60_19
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8480..8833
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Dyella japonica RepID=UPI000315AEAA
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
50S ribosomal protein L18
scnpilot_cont_500_p_scaffold_60_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8944..9453
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK5_9GAMM rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhod
30S ribosomal protein S5
scnpilot_cont_500_p_scaffold_60_21
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9446..9643
DNA (198bp) protein (66aa)
50S ribosomal protein L30 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK6_9GAMM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lute
LSU ribosomal protein L30P
scnpilot_cont_500_p_scaffold_60_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9649..10080
DNA (432bp) protein (144aa)
50S ribosomal protein L15 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK7_9GAMM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
50S ribosomal protein L15
scnpilot_cont_500_p_scaffold_60_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10085..11407
DNA (1323bp) protein (441aa)
Protein translocase subunit SecY n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VM91_9GAMM rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
preprotein translocase, SecY subunit
scnpilot_cont_500_p_scaffold_60_24
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11544..11900
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=1 Tax=Dyella japonica RepID=UPI0002E572E6
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangning
scnpilot_cont_500_p_scaffold_60_25
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11913..12299
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=3 Tax=Rhodanobacter RepID=I4WKT5_9GAMM
SSU ribosomal protein S11P
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter
scnpilot_cont_500_p_scaffold_60_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12312..12938
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=2 Tax=Rhodanobacter RepID=M4NE15_9GAMM rbh
SSU ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
scnpilot_cont_500_p_scaffold_60_27
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12954..13952
DNA (999bp) protein (333aa)
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ41_9GAMM rbh
scnpilot_cont_500_p_scaffold_60_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14199..14582
DNA (384bp) protein (128aa)
50S ribosomal protein L17 n=1 Tax=Rhodanobacter denitrificans RepID=I4WKT8_9GAMM
LSU ribosomal protein L17P
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhod
scnpilot_cont_500_p_scaffold_60_29
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14681..15262
DNA (582bp) protein (194aa)
Disulfide bond formation protein B n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNL4_9GAMM
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria;
disulfide bond formation protein B
scnpilot_cont_500_p_scaffold_60_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15259..16629
DNA (1371bp) protein (457aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNL5_9GAMM rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EIM01057.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
Displaying items 1-30 of 400 in total

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