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scnpilot_cont_500_p_scaffold_61

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Displaying items 1-30 of 235 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_61_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194..943
DNA (750bp) protein (250aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomona
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND80_9GAMM rbh
pseudouridine synthase family protein
scnpilot_cont_500_p_scaffold_61_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(954..2147)
DNA (1194bp) protein (398aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransfera
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9I3_9GAMM rbh
scnpilot_cont_500_p_scaffold_61_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2208..5831)
DNA (3624bp) protein (1208aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIU9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99390.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
uncharacterized protein involved in outer membrane biogenesis
scnpilot_cont_500_p_scaffold_61_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5970..7004)
DNA (1035bp) protein (345aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=666685 species="Bact
L-threonine 3-dehydrogenase n=2 Tax=Rhodanobacter denitrificans RepID=M4NGB9_9GAMM rbh
scnpilot_cont_500_p_scaffold_61_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7138..9273
DNA (2136bp) protein (712aa)
Putative lipoprotein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIU7_9GAMM rbh
Putative lipoprotein {ECO:0000313|EMBL:EIL99388.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thio
hypothetical protein
scnpilot_cont_500_p_scaffold_61_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9379..11541
DNA (2163bp) protein (721aa)
Peptidase S46 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIU6_9GAMM rbh
Peptidase S46 {ECO:0000313|EMBL:EIL99387.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans
uncharacterized protein involved in exopolysaccharide biosynthesis
scnpilot_cont_500_p_scaffold_61_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11652..13814
DNA (2163bp) protein (721aa)
Peptidase S46 n=1 Tax=Rhodanobacter denitrificans RepID=M4ND84_9GAMM rbh
Peptidase S46
Peptidase S46 {ECO:0000313|EMBL:AGG88700.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
scnpilot_cont_500_p_scaffold_61_8
unknown

Not on your lists

13847..14014
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_61_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14011..14961
DNA (951bp) protein (317aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA dimethylallyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WV79_9GAMM rbh
tRNA dimethylallyltransferase
scnpilot_cont_500_p_scaffold_61_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15115..15393
DNA (279bp) protein (93aa)
RNA-binding protein Hfq n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW35_9GAMM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhoda
RNA-binding protein Hfq
scnpilot_cont_500_p_scaffold_61_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15466..16797
DNA (1332bp) protein (444aa)
GTPase HflX n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIU2_9GAMM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xantho
GTPase HflX
scnpilot_cont_500_p_scaffold_61_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16951..18030
DNA (1080bp) protein (360aa)
Integral membrane protease subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPB7_9GAMM
Integral membrane protease subunit {ECO:0000313|EMBL:EIL89058.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
HflK protein
scnpilot_cont_500_p_scaffold_61_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18027..18899
DNA (873bp) protein (291aa)
Protein HflC n=1 Tax=Rhodanobacter denitrificans RepID=M4ND89_9GAMM rbh
membrane protease subunit, stomatin/prohibitin
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
scnpilot_cont_500_p_scaffold_61_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19220..20512
DNA (1293bp) protein (431aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPC0_9GAMM rbh
scnpilot_cont_500_p_scaffold_61_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20644..21090
DNA (447bp) protein (149aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Rhodanobacter sp. 115 RepID=I4W566_9GAMM
msrB; methionine-R-sulfoxide reductase
scnpilot_cont_500_p_scaffold_61_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21090..21605
DNA (516bp) protein (172aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Rhodanobacter sp. 115 RepID=I4W565_9GAMM
methionine-S-sulfoxide reductase
scnpilot_cont_500_p_scaffold_61_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21646..22017)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E4BAF8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCP14481.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
scnpilot_cont_500_p_scaffold_61_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22039..22809)
DNA (771bp) protein (257aa)
Response regulator of the LytR/AlgR family n=1 Tax=Rhodanobacter denitrificans RepID=M4NDD2_9GAMM rbh
response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:AGG88724.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_cont_500_p_scaffold_61_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22806..24068)
DNA (1263bp) protein (421aa)
Putative regulator of cell autolysis n=1 Tax=Rhodanobacter denitrificans RepID=M4NDA4_9GAMM rbh
putative regulator of cell autolysis
Putative regulator of cell autolysis {ECO:0000313|EMBL:AGG88725.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba
scnpilot_cont_500_p_scaffold_61_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24349..27003
DNA (2655bp) protein (885aa)
Aminopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPL5_9GAMM rbh
Aminopeptidase {ECO:0000313|EMBL:EIL89156.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
aminopeptidase N
scnpilot_cont_500_p_scaffold_61_21
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27076..28239)
DNA (1164bp) protein (388aa)
Aminotransferases class-I n=1 Tax=Cellvibrio sp. BR RepID=I3IAM2_9GAMM
Aminotransferases class-I {ECO:0000313|EMBL:EIK45107.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. B
class I and II aminotransferase
scnpilot_cont_500_p_scaffold_61_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28557..30785)
DNA (2229bp) protein (743aa)
Generic methyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WJF8_9GAMM rbh
Generic methyltransferase {ECO:0000313|EMBL:EIL99599.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
generic methyltransferase
scnpilot_cont_500_p_scaffold_61_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31084..34005)
DNA (2922bp) protein (974aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine d
glycine dehydrogenase, decarboxylating (EC:1.4.4.2)
Glycine dehydrogenase (decarboxylating) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWR7_9GAMM rbh
scnpilot_cont_500_p_scaffold_61_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34421..34828
DNA (408bp) protein (136aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIR4_9GAMM
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EIL99355.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacte
lactoylglutathione lyase-like lyase
scnpilot_cont_500_p_scaffold_61_25
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34920..35549)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349FE1F rbh
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:AJE14167.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearic
scnpilot_cont_500_p_scaffold_61_26
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35849..38416
DNA (2568bp) protein (856aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1217721 species="Bacteria; Proteobacteria; Gam
exoribonuclease R n=1 Tax=Dyella japonica RepID=UPI0002E4A9CB rbh
exoribonuclease R
scnpilot_cont_500_p_scaffold_61_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38413..39159
DNA (747bp) protein (249aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8J6_9GAMM rbh
23S rRNA methyltransferase
scnpilot_cont_500_p_scaffold_61_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39156..39422
DNA (267bp) protein (89aa)
Permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8J5_9GAMM
Permease {ECO:0000313|EMBL:EIL95786.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
membrane protein
scnpilot_cont_500_p_scaffold_61_29
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39517..39840
DNA (324bp) protein (108aa)
Transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8J4_9GAMM
Transporter {ECO:0000313|EMBL:EIL95785.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
multidrug transporter
scnpilot_cont_500_p_scaffold_61_30
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39871..40602)
DNA (732bp) protein (244aa)
PhoU family transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI0002FBA774 rbh
PhoU family transcriptional regulator rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dye
Displaying items 1-30 of 235 in total

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