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scnpilot_cont_500_p_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_85_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2609
DNA (2607bp) protein (869aa)
Transposase, TnpA family n=1 Tax=Rhodanobacter denitrificans RepID=M4NGM8_9GAMM
Transposase, TnpA family {ECO:0000313|EMBL:AGG88813.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter d
transposase, TnpA family
scnpilot_cont_500_p_scaffold_85_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2807..3529)
DNA (723bp) protein (241aa)
Putative cointegrase resolution protein n=2 Tax=Rhodanobacter RepID=I4WWN1_9GAMM
Putative cointegrase resolution protein {ECO:0000313|EMBL:EIL90322.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
Plasmid replication region DNA-binding N-term
scnpilot_cont_500_p_scaffold_85_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3698..4861
DNA (1164bp) protein (388aa)
Phage integrase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN0_9GAMM rbh
site-specific recombinase XerD rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:AGG88839.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;
scnpilot_cont_500_p_scaffold_85_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4858..5166
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDK5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88840.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
scnpilot_cont_500_p_scaffold_85_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5283..6857)
DNA (1575bp) protein (525aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEH5_9GAMM rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGG89169.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomon
scnpilot_cont_500_p_scaffold_85_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6951..7352)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN4_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89167.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
scnpilot_cont_500_p_scaffold_85_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7444..8625)
DNA (1182bp) protein (394aa)
Major facilitator transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN5_9GAMM rbh
Major Facilitator Superfamily transporter
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:AGG89166.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhod
scnpilot_cont_500_p_scaffold_85_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8710..9960)
DNA (1251bp) protein (417aa)
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NED1_9GAMM rbh
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AGG89165.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba
scnpilot_cont_500_p_scaffold_85_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9944..10624)
DNA (681bp) protein (227aa)
DNA-binding response regulator ColR n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN7_9GAMM rbh
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG89164.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacte
scnpilot_cont_500_p_scaffold_85_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10630..13764)
DNA (3135bp) protein (1045aa)
Multidrug ABC transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN8_9GAMM rbh
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG89163.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; R
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_cont_500_p_scaffold_85_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13761..14813)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN9_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89162.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_cont_500_p_scaffold_85_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14810..16273)
DNA (1464bp) protein (488aa)
Outer membrane efflux protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWP0_9GAMM rbh
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG89161.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
scnpilot_cont_500_p_scaffold_85_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16325..18043)
DNA (1719bp) protein (573aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEC7_9GAMM rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGG89160.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomon
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
scnpilot_cont_500_p_scaffold_85_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18040..19065)
DNA (1026bp) protein (342aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWP2_9GAMM rbh
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGG89159.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
scnpilot_cont_500_p_scaffold_85_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19259..19816)
DNA (558bp) protein (186aa)
Co/Zn/Cd efflux system component n=1 Tax=Rhodanobacter denitrificans RepID=I4WWR8_9GAMM
Co/Zn/Cd efflux system component Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Co/Zn/Cd efflux system component
scnpilot_cont_500_p_scaffold_85_16
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20137..23130
DNA (2994bp) protein (998aa)
Transposase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWJ9_9GAMM rbh
Transposase for transposon Tn4556 {ECO:0000313|EMBL:GAC32312.1}; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Para
transposase
scnpilot_cont_500_p_scaffold_85_17
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23222..24331)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344ECB1 rbh
Type II restriction enzyme {ECO:0000313|EMBL:KGM53140.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsen
hypothetical protein
scnpilot_cont_500_p_scaffold_85_18
unknown

Not on your lists

comp(24312..24944)
DNA (633bp) protein (211aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_85_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24948..26741
DNA (1794bp) protein (598aa)
copper oxidase n=1 Tax=Dyella ginsengisoli RepID=UPI000348EE6E rbh
Copper-resistance protein, CopA family protein {ECO:0000313|EMBL:EIL89957.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
copper resistance protein CopA
scnpilot_cont_500_p_scaffold_85_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26738..28174
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CCD5B rbh
uncharacterized protein involved in copper resistance
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:AGG88843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
scnpilot_cont_500_p_scaffold_85_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28188..29276
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B9FBF rbh
Cytochrome c family protein {ECO:0000313|EMBL:EIL98576.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
ketosteroid isomerase-like enzyme
scnpilot_cont_500_p_scaffold_85_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29273..29728
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003451B6A rbh
putative metal-binding protein
Putative metal-binding protein {ECO:0000313|EMBL:AGG88845.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;
scnpilot_cont_500_p_scaffold_85_23
unknown

Not on your lists

29989..30429
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003472C55 rbh
scnpilot_cont_500_p_scaffold_85_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30505..31788
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00038293FB rbh
Putative outer membrane efflux protein {ECO:0000313|EMBL:EIM01183.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
outer membrane protein
scnpilot_cont_500_p_scaffold_85_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31785..33287
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034DF473 rbh
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family {ECO:0000313|EMBL:EIL94374.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xa
cation transporter
scnpilot_cont_500_p_scaffold_85_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33284..36466
DNA (3183bp) protein (1061aa)
cation transporter n=1 Tax=Dyella ginsengisoli RepID=UPI00034C0FD6 rbh
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG88851.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; R
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_cont_500_p_scaffold_85_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36463..36813
DNA (351bp) protein (117aa)
Copper binding periplasmic protein CusF n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88852.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_cont_500_p_scaffold_85_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36944..37285
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01187.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
scnpilot_cont_500_p_scaffold_85_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37420..37827)
DNA (408bp) protein (136aa)
Hg(Ii)-responsive transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ6_9GAMM
Hg(Ii)-responsive transcriptional regulator {ECO:0000313|EMBL:EIM01188.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
transcriptional regulator MerR
scnpilot_cont_500_p_scaffold_85_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37896..38318
DNA (423bp) protein (141aa)
Putative mercury transport protein MerC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ7_9GAMM
Putative mercury transport protein MerC {ECO:0000313|EMBL:EIM01189.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
merC mercury resistance family protein
Displaying items 1-30 of 129 in total

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