ggKbase home page

scnpilot_cont_500_p_scaffold_137

Search features with annotation key words

Displaying items 1-30 of 259 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_137_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(319..1398)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B8F4A
Fimbrial protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_137_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1438..4170)
DNA (2733bp) protein (911aa)
P pilus assembly protein, porin PapC (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VK97_9GAMM
P pilus assembly protein, porin PapC {ECO:0000313|EMBL:EIL87638.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba
hypothetical protein
scnpilot_cont_500_p_scaffold_137_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4185..4922)
DNA (738bp) protein (246aa)
P pilus assembly protein, chaperone PapD n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL01_9GAMM
P pilus assembly protein, chaperone PapD {ECO:0000313|EMBL:EIL87892.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
molecular chaperone EcpD
scnpilot_cont_500_p_scaffold_137_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4994..5578)
DNA (585bp) protein (195aa)
Major type 1 subunit fimbrin (Pilin) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL02_9GAMM
Major type 1 subunit fimbrin (Pilin) {ECO:0000313|EMBL:EIL87893.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
fimbrial protein
scnpilot_cont_500_p_scaffold_137_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6157..6768
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL04_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87895.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_cont_500_p_scaffold_137_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6765..7232
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2X7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93818.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
scnpilot_cont_500_p_scaffold_137_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7229..7423
DNA (195bp) protein (65aa)
XRE family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ64_9GAMM
putative transcriptional regulator Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative transcriptional regulator
scnpilot_cont_500_p_scaffold_137_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7440..9026
DNA (1587bp) protein (529aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4NDH8_9GAMM rbh
putative hydrolase or acyltransferase of alpha/beta superfamily Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_cont_500_p_scaffold_137_9
unknown

Not on your lists

9023..9196
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_137_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9193..9927
DNA (735bp) protein (245aa)
Sodium ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2X4_9GAMM rbh
ABC-type Na+ transport system, ATPase component Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
ABC-type Na+ transport system, ATPase component
scnpilot_cont_500_p_scaffold_137_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9924..11129
DNA (1206bp) protein (402aa)
Na+ efflux pump ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2X3_9GAMM rbh
Na+ efflux pump ABC transporter permease {ECO:0000313|EMBL:EIL93814.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
ABC-type Na+ efflux pump, permease component
scnpilot_cont_500_p_scaffold_137_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11151..12002)
DNA (852bp) protein (284aa)
Hydrolase of the alpha-beta fold superfamily protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL11_9GAMM rbh
Hydrolase of the alpha-beta fold superfamily protein {ECO:0000313|EMBL:EIL87902.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_cont_500_p_scaffold_137_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12105..13199)
DNA (1095bp) protein (365aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ21_9GAMM rbh
scnpilot_cont_500_p_scaffold_137_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13226..13915
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ20_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89311.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
scnpilot_cont_500_p_scaffold_137_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13985..14242
DNA (258bp) protein (86aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL14_9GAMM
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
twin arginine-targeting protein translocase, TatA/E family
scnpilot_cont_500_p_scaffold_137_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14273..14692
DNA (420bp) protein (140aa)
Sec-independent protein translocase protein TatB n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL15_9GAMM
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
twin arginine-targeting protein translocase TatB
scnpilot_cont_500_p_scaffold_137_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14679..15440
DNA (762bp) protein (254aa)
Sec-independent protein translocase protein TatC n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL16_9GAMM rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
twin arginine targeting protein translocase subunit TatC
scnpilot_cont_500_p_scaffold_137_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15505..17721)
DNA (2217bp) protein (739aa)
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4ND94_9GAMM rbh
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily {ECO:0000313|EMBL:EIL89788.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
scnpilot_cont_500_p_scaffold_137_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17801..19030)
DNA (1230bp) protein (410aa)
Multifunctional CCA protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W341_9GAMM rbh
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; R
tRNA nucleotidyltransferase/poly(A) polymerase
scnpilot_cont_500_p_scaffold_137_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19108..21234)
DNA (2127bp) protein (709aa)
Soluble lytic murein transglycosylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUZ6_9GAMM rbh
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EIM03288.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
soluble lytic murein transglycosylase-like protein
scnpilot_cont_500_p_scaffold_137_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21365..22981
DNA (1617bp) protein (539aa)
Exo-beta-1,3-glucanase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDA7_9GAMM rbh
exo-beta-1,3-glucanase
Exo-beta-1,3-glucanase {ECO:0000313|EMBL:AGG87428.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
scnpilot_cont_500_p_scaffold_137_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22995..23678
DNA (684bp) protein (228aa)
Short chain dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z9_9GAMM
Short chain dehydrogenase {ECO:0000313|EMBL:EIL95240.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
short-chain dehydrogenase/reductase SDR
scnpilot_cont_500_p_scaffold_137_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23662..24054)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAE5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87429.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_cont_500_p_scaffold_137_24
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24051..24845)
DNA (795bp) protein (265aa)
endonuclease n=1 Tax=Dyella japonica RepID=UPI00030FF6A7
endonuclease
Endonuclease {ECO:0000313|EMBL:AIF46710.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_cont_500_p_scaffold_137_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24914..25582)
DNA (669bp) protein (223aa)
Thiol:disulfide interchange protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WVE4_9GAMM rbh
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
protein-disulfide isomerase
scnpilot_cont_500_p_scaffold_137_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25630..26511)
DNA (882bp) protein (294aa)
Protein-disulfide isomerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCD8_9GAMM rbh
protein-disulfide isomerase
Protein-disulfide isomerase {ECO:0000313|EMBL:AGG87432.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
scnpilot_cont_500_p_scaffold_137_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26574..27368)
DNA (795bp) protein (265aa)
Cytochrome c553 n=1 Tax=Rhodanobacter denitrificans RepID=M4NDB2_9GAMM rbh
cytochrome c553
Cytochrome c553 {ECO:0000313|EMBL:AGG87433.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
scnpilot_cont_500_p_scaffold_137_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27505..28107
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003496A79 rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
GTP-binding protein
scnpilot_cont_500_p_scaffold_137_29
unknown

Not on your lists

28249..28719
DNA (471bp) protein (157aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_137_30
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28753..29244)
DNA (492bp) protein (164aa)
GAF sensor protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ45_9GAMM
GAF sensor protein {ECO:0000313|EMBL:EIL89336.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus
GAF domain-containing protein
Displaying items 1-30 of 259 in total

View Taxonomy