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scnpilot_cont_500_p_scaffold_237

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_237_1
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1953
DNA (1953bp) protein (651aa)
hypothetical protein, partial n=1 Tax=Dyella japonica RepID=UPI000362891F
Uncharacterized protein {ECO:0000313|EMBL:KHD19510.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacch
hypothetical protein
scnpilot_cont_500_p_scaffold_237_2
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1950..3728
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000368FC97 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV36380.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojue
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_237_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3841..4140
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8X3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95914.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_cont_500_p_scaffold_237_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4137..4388
DNA (252bp) protein (84aa)
Stress-induced morphogen n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWM1_9GAMM
Stress-induced morphogen {ECO:0000313|EMBL:EIL91612.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
transcriptional regulator, BolA protein family
scnpilot_cont_500_p_scaffold_237_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4532..8041
DNA (3510bp) protein (1170aa)
Chromosome partition protein Smc n=1 Tax=Rhodanobacter denitrificans RepID=M4NDG4_9GAMM rbh
chromosome segregation protein SMC
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
scnpilot_cont_500_p_scaffold_237_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8149..9129
DNA (981bp) protein (327aa)
Cell division protein ZipA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIK5_9GAMM rbh
Cell division protein ZipA {ECO:0000256|RuleBase:RU003612}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
cell division protein ZipA
scnpilot_cont_500_p_scaffold_237_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9733..10695
DNA (963bp) protein (321aa)
Hydrogenase (NiFe) small subunit (HydA) n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEA0_9BRAD rbh
Hydrogenase (NiFe) small subunit (HydA) {ECO:0000313|EMBL:ERF82000.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="B
NADH ubiquinone oxidoreductase 20 kDa subunit rbh
scnpilot_cont_500_p_scaffold_237_8
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

10714..12315
DNA (1602bp) protein (534aa)
cytochrome-c3 hydrogenase n=1 Tax=Mastigocladopsis repens RepID=UPI0002E0A346 rbh
Cytochrome-c3 hydrogenase {ECO:0000313|EMBL:KIJ76873.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
nickel-dependent hydrogenase large subunit
scnpilot_cont_500_p_scaffold_237_9
Nitrospira moscoviensis, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12378..12692
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YAW6_MESOW
Uncharacterized protein {ECO:0000313|EMBL:AIN51359.1}; TaxID=42253 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Nitrospira moscoviensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_237_10
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12846..13187
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QDQ5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG57911.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_237_11
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13282..13743
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003608CA3
Hydrogenase maturation protease {ECO:0000313|EMBL:KIJ75974.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.
hupW; hydrogenase maturation protease
scnpilot_cont_500_p_scaffold_237_12
unknown

Not on your lists

13740..14051
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_237_13
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14120..15319)
DNA (1200bp) protein (400aa)
High-affinity nickel-transporter n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZX5_THIK1 rbh
high-affinity nickel-transporter
High-affinity nickel-transporter {ECO:0000313|EMBL:ADG32403.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K1
scnpilot_cont_500_p_scaffold_237_14
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15468..17546)
DNA (2079bp) protein (693aa)
TonB-denpendent receptor n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002557AE6 rbh
TonB-dependent receptor {ECO:0000313|EMBL:KGQ20567.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdone
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_237_15
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17744..18673)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036CED69 rbh
CbbR protein {ECO:0000313|EMBL:EIZ04701.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_237_16
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18779..20278
DNA (1500bp) protein (500aa)
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=9
Ribulose bisphosphate carboxylase large chain n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXT6_POLGS rbh
rbcL; ribulose bisphosphate carboxylase large chain
scnpilot_cont_500_p_scaffold_237_17
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20293..20709
DNA (417bp) protein (139aa)
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
Ribulose-bisphosphate carboxylase {ECO:0000313|EMBL:ADG17253.1}; EC=4.1.1.39 {ECO:0000313|EMBL:ADG17253.1};; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkho
ribulose bisphosphate carboxylase small chain n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036B2CAD
scnpilot_cont_500_p_scaffold_237_18
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20719..21654
DNA (936bp) protein (312aa)
CbbX n=1 Tax=Burkholderia kururiensis RepID=UPI0003484431 rbh
CbbX protein {ECO:0000313|EMBL:EDT12668.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;
CbbX protein
scnpilot_cont_500_p_scaffold_237_19
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21651..22742
DNA (1092bp) protein (364aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosph
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379BB32 rbh
fbp; fructose-1,6-bisphosphatase class 1
scnpilot_cont_500_p_scaffold_237_20
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22742..23617
DNA (876bp) protein (292aa)
Phosphoribulokinase {ECO:0000256|RuleBase:RU004082}; EC=2.7.1.19 {ECO:0000256|RuleBase:RU004082};; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae
phosphoribulokinase (EC:2.7.1.19)
phosphoribulokinase n=1 Tax=Rudaea cellulosilytica RepID=UPI000374B9C4 rbh
scnpilot_cont_500_p_scaffold_237_21
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23627..25687
DNA (2061bp) protein (687aa)
Transketolase (EC:2.2.1.1)
Transketolase {ECO:0000313|EMBL:CDM25504.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CDM25504.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellani
Transketolase n=2 Tax=Alcaligenes RepID=M5J3L3_9BURK
scnpilot_cont_500_p_scaffold_237_22
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25794..26807
DNA (1014bp) protein (338aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7Z9B0_9GAMM rbh
Fructose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:EIT68262.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="H
scnpilot_cont_500_p_scaffold_237_23
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27059..27283)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003720A8D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERF82001.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
scnpilot_cont_500_p_scaffold_237_24
Nitrospira moscoviensis, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(27280..28830)
DNA (1551bp) protein (517aa)
sn-glycerol 3-phosphate transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GWT9_9BRAD rbh
Hydrogenase transcriptional regulatory protein {ECO:0000313|EMBL:AIN51355.1}; TaxID=42253 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Nitrospira moscoviensis.;
Fis family two component sigma-54 specific transcriptional regulator
scnpilot_cont_500_p_scaffold_237_25
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28827..29816)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000372212C rbh
Hydrogenase nickel incorporation protein HypB {ECO:0000313|EMBL:CDX14229.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sourc
hypB2; hydrogenase nickel incorporation protein HypB
scnpilot_cont_500_p_scaffold_237_26
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(29807..30049)
DNA (243bp) protein (81aa)
hydrogenase nickel incorporation protein HypA n=1 Tax=Fischerella muscicola RepID=UPI00030233D1
Hydrogenase nickel incorporation protein HypA {ECO:0000313|EMBL:KIY13089.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
(NiFe) hydrogenase nickel incorporation protein HypA
scnpilot_cont_500_p_scaffold_237_27
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30049..31107)
DNA (1059bp) protein (353aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IHD8_XANP2 rbh
hydrogenase expression/formation protein HypE
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:ABS67431.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source=
scnpilot_cont_500_p_scaffold_237_28
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31104..32231)
DNA (1128bp) protein (376aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZZ5_THIK1 rbh
hydrogenase expression/formation protein HypD
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:ADG32423.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermed
scnpilot_cont_500_p_scaffold_237_29
Nitrospira moscoviensis, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(32228..32950)
DNA (723bp) protein (241aa)
Sugar isomerase (SIS) n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0I3_NITHN
Phosphoheptose isomerase {ECO:0000313|EMBL:AIN51369.1}; TaxID=42253 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Nitrospira moscoviensis.;"
sugar isomerase (SIS)
scnpilot_cont_500_p_scaffold_237_30
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32947..33231)
DNA (285bp) protein (95aa)
HypC protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZAI7_9BRAD
HypC protein
HypC protein {ECO:0000313|EMBL:BAM90366.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicu
Displaying items 1-30 of 49 in total

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