ggKbase home page

scnpilot_cont_500_p_scaffold_104_23

Organism: SCNPILOT_CONT_500_P_Xanthomonadales_69_150

near complete RP 51 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(31218..32222)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 332.0
  • Bit_score: 575
  • Evalue 5.90e-161
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 332.0
  • Bit_score: 569
  • Evalue 5.00e-160
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDY9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 332.0
  • Bit_score: 569
  • Evalue 1.80e-159
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGCAGACGGCAACTTCCCGCGACGTACCTCACGGTGTGCGTCAAGTGGCGATCGGCCCCGAGCGGGACGGCCAGCGCATCGACAACGCACTGGCGACCCTGCTCAAGGGCGTGCCGAAAAGCATGATCTATCGGCTGCTGCGCACCGGCCAGGTGCGCGTGAACGGCAAGCGGGCCAAGCCCGATACGCGGCTAAGTGACGGCGATATGCTGCGAATTCCGCCGATCCGGGTGGCAGAACGACCGGAAGGGCGGGAAGCGCCGGGCGCTTTGGTCTCGTCCCTTGCGGAGACGGTGATCTTCGAGGACAAGCACTTCCTGGTGATCGACAAGCCCTCGGGCATCGCCAGCCATGGCGGCAGCGGCGTCAGCCACGGCGCGATCGAACTGCTGCGGGCGGCGCGCCCGCACGAGTCGCTGGAACTGGTGCACCGGCTGGATCGCGACACCAGCGGCGTGCTGGTGCTGGCGAGGTCGCGGGCGGGGTTGACCGGCCTGCAGGCGGCGATCCGCGCCGGCGAGGTCACCAAGCAGTACCTGTGCCTGATGGTCGGCCACCCGTCCAAGGCGAAATTCGACGTGAACGCGCCGCTGCGCAAGTTCGCCCTGCAGGGCGGCGAGCGCATGGTGCGGGTCAGCGAGGACGGCAAGCCGGCGCTGACCTTCTTCCGCGAAATGGAGCAGTACCCCGGCGCGCGCCTGATGCAGGCCACCCTGGGCACCGGCCGTACCCACCAGATCCGCGTGCACGCCGCCCACATCGGCCATCCGCTGGCGGGCGATCCGAAATACGGCGACCGCGAGATGAACAAGCGCTTCCGCGAGATGGGGCTGCAGCGGCTGTTCCTGCACGCCGCGCATCTCAGCTTCGAGCTGGACGGGCGCCTCTACAGCTTTTCGGCGCCGTTGCCGGACGACCTCAAGGATTTCCTCGACGTGCTGGCGGTGAAGGGCAAGCACCTGCCGTACATCCAGGCGCTGAAATCCCGCGGCGATCATTCCTGA
PROTEIN sequence
Length: 335
MQTATSRDVPHGVRQVAIGPERDGQRIDNALATLLKGVPKSMIYRLLRTGQVRVNGKRAKPDTRLSDGDMLRIPPIRVAERPEGREAPGALVSSLAETVIFEDKHFLVIDKPSGIASHGGSGVSHGAIELLRAARPHESLELVHRLDRDTSGVLVLARSRAGLTGLQAAIRAGEVTKQYLCLMVGHPSKAKFDVNAPLRKFALQGGERMVRVSEDGKPALTFFREMEQYPGARLMQATLGTGRTHQIRVHAAHIGHPLAGDPKYGDREMNKRFREMGLQRLFLHAAHLSFELDGRLYSFSAPLPDDLKDFLDVLAVKGKHLPYIQALKSRGDHS*