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scnpilot_cont_500_p_scaffold_1141

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1141_1
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..349
DNA (348bp) protein (116aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z2N2_9BRAD
pyridine nucleotide transhydrogenase (proton pump) beta subunit
scnpilot_cont_500_p_scaffold_1141_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(447..1073)
DNA (627bp) protein (209aa)
Methyltransferase FkbM family n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VGI4_RHOPX
FkbM family methyltransferase
Methyltransferase FkbM family {ECO:0000313|EMBL:ADU44124.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseud
scnpilot_cont_500_p_scaffold_1141_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1208..2533
DNA (1326bp) protein (442aa)
ionic transporter y4hA n=1 Tax=Afipia birgiae RepID=UPI0003677A16 rbh
Ionic transporter y4hA {ECO:0000313|EMBL:KJC57842.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
ionic transporter y4hA
scnpilot_cont_500_p_scaffold_1141_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2551..2838
DNA (288bp) protein (96aa)
cupin n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034DC783
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD06150.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_cont_500_p_scaffold_1141_5
unknown

Not on your lists

2891..3280
DNA (390bp) protein (130aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1141_6
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3364..4860
DNA (1497bp) protein (499aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QKW6_BRESC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL01780.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" sourc
scnpilot_cont_500_p_scaffold_1141_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4965..5672
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNY7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62060.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
scnpilot_cont_500_p_scaffold_1141_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5676..6794)
DNA (1119bp) protein (373aa)
LysR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002E46EB5 rbh
ModE molybdate transport repressor domain-containing protein {ECO:0000313|EMBL:EKS37030.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
formate dehydrogenase
scnpilot_cont_500_p_scaffold_1141_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6985..7191
DNA (207bp) protein (69aa)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:KJC60881.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizo
scnpilot_cont_500_p_scaffold_1141_10
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7261..7566)
DNA (306bp) protein (102aa)
30S ribosomal protein S21 n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G0Z0_9BRAD
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyr
scnpilot_cont_500_p_scaffold_1141_11
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7829..8545
DNA (717bp) protein (239aa)
Aquaporin Z n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D8Q3_BRAJP
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM2
aquaporin
scnpilot_cont_500_p_scaffold_1141_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8613..9722)
DNA (1110bp) protein (370aa)
purK; phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IF38_9BRAD rbh
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
scnpilot_cont_500_p_scaffold_1141_13
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9719..10207)
DNA (489bp) protein (163aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000315C978
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
scnpilot_cont_500_p_scaffold_1141_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10335..11006
DNA (672bp) protein (224aa)
Diguanylate cyclase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J052_RHOP2
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ABD06158.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas pal
scnpilot_cont_500_p_scaffold_1141_15
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11232..11438)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034C654D
Uncharacterized protein {ECO:0000313|EMBL:EAQ34982.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
scnpilot_cont_500_p_scaffold_1141_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11667..11852
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUL2_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31135.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1141_17
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11959..13062)
DNA (1104bp) protein (368aa)
Peptide-methionine (R)-S-oxide reductase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HBX3_9BRAD rbh
Peptide-methionine (R)-S-oxide reductase {ECO:0000313|EMBL:ERF82273.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="
FAD dependent oxidoreductase
scnpilot_cont_500_p_scaffold_1141_18
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13306..15999
DNA (2694bp) protein (898aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GXP4_9BRAD rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ERF82272.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobiu
hypothetical protein
scnpilot_cont_500_p_scaffold_1141_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16158..17309
DNA (1152bp) protein (384aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizob
ABC transporter ATP-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034B7465 rbh
spermidine/putrescine ABC transporter ATP-binding subunit
scnpilot_cont_500_p_scaffold_1141_20
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17311..18222
DNA (912bp) protein (304aa)
putrescine/spermidine ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI000378F0D3 rbh
ABC transporter permease
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KJC38518.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" so
scnpilot_cont_500_p_scaffold_1141_21
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18219..19037
DNA (819bp) protein (273aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W7K8_9BRAD rbh
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJN14762.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
spermidine/putrescine ABC transporter permease
scnpilot_cont_500_p_scaffold_1141_22
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19056..20969)
DNA (1914bp) protein (638aa)
cell envelope biogenesis protein AsmA n=1 Tax=Bradyrhizobium elkanii RepID=UPI000361AEB5 rbh
Cell envelope biogenesis protein AsmA {ECO:0000313|EMBL:KJC43769.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
AsmA
scnpilot_cont_500_p_scaffold_1141_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21255..21959
DNA (705bp) protein (235aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5)
3-oxoacid CoA-transferase, subunit A n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13B68_RHOPS rbh
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KIZ45072.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rh
scnpilot_cont_500_p_scaffold_1141_24
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22044..22442
DNA (399bp) protein (133aa)
coenzyme A transferase (EC:2.8.3.5)
Butyryl-CoA:acetate CoA transferase {ECO:0000313|EMBL:ABA04273.1}; EC=2.8.3.8 {ECO:0000313|EMBL:ABA04273.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhi
Coenzyme A transferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYE9_9BRAD
Displaying 24 items

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