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scnpilot_cont_500_p_scaffold_1166

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1166_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50..238
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE65026.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
scnpilot_cont_500_p_scaffold_1166_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235..429
DNA (195bp) protein (65aa)
Putative lipoprotein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JK47_OLICO
lipoprotein
Lipoprotein {ECO:0000313|EMBL:KIZ46693.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
scnpilot_cont_500_p_scaffold_1166_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

437..1567
DNA (1131bp) protein (377aa)
TrbL/VirB6 plasmid conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK48_OLICO rbh
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53311.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
virB6; type IV secretion protein VirB6
scnpilot_cont_500_p_scaffold_1166_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1564..2280
DNA (717bp) protein (239aa)
Type IV secretion protein VirB8 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK49_OLICO rbh
virulence protein
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53117.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
scnpilot_cont_500_p_scaffold_1166_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2277..3080
DNA (804bp) protein (268aa)
P-type conjugative transfer protein VirB9 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK50_OLICO rbh
virB9; type IV secretion protein VirB9
Type IV secretion protein VirB9 {ECO:0000313|EMBL:AEI08310.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha c
scnpilot_cont_500_p_scaffold_1166_6
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3083..4435
DNA (1353bp) protein (451aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK51_OLICO rbh
virB10; type IV secretion protein VirB10
Type IV secretion protein VirB10 {ECO:0000313|EMBL:AEI08309.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha
scnpilot_cont_500_p_scaffold_1166_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4398..5396
DNA (999bp) protein (333aa)
Type II secretion system protein E n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH6_NITHX
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ABE65021.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;"
scnpilot_cont_500_p_scaffold_1166_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5360..7354
DNA (1995bp) protein (665aa)
TRAG protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH7_NITHX
TRAG protein
TRAG protein {ECO:0000313|EMBL:ABE65020.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter h
scnpilot_cont_500_p_scaffold_1166_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7532..7861
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003667265
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidis
phosphate ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_1166_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8305..8634)
DNA (330bp) protein (110aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI000313EF84
Membrane protein {ECO:0000313|EMBL:KIZ48012.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustri
hypothetical protein
scnpilot_cont_500_p_scaffold_1166_11
unknown

Not on your lists

8688..8855
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1166_12
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8775..9728)
DNA (954bp) protein (318aa)
Putative regulator putative molybdate and DNA-binding domains, excisionase family protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA3_METED rbh
regulator; molybdate and DNA-binding domains, excisionase family protein
Putative regulator putative molybdate and DNA-binding domains, excisionase family protein {ECO:0000313|EMBL:CAX24301.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
scnpilot_cont_500_p_scaffold_1166_13
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9955..10785
DNA (831bp) protein (277aa)
ABC transporter, periplasmic protein molybdate transporter n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA2_METED rbh
molybdate ABC transporter substrate-binding protein
ABC transporter, periplasmic protein molybdate transporter {ECO:0000313|EMBL:CAX24300.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylo
scnpilot_cont_500_p_scaffold_1166_14
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10801..11469
DNA (669bp) protein (223aa)
ABC transporter, permease molybdate transporter n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA1_METED rbh
modB; molybdate ABC transporter permease
ABC transporter, permease molybdate transporter {ECO:0000313|EMBL:CAX24299.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;
scnpilot_cont_500_p_scaffold_1166_15
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11462..12190
DNA (729bp) protein (243aa)
ABC transporter, ATPase molybdate transporter n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA0_METED rbh
modC; molybdate ABC transporter ATPase
ABC transporter, ATPase molybdate transporter {ECO:0000313|EMBL:CAX24298.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;"
scnpilot_cont_500_p_scaffold_1166_16
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12190..13011
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CF99_METED rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAX24297.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
scnpilot_cont_500_p_scaffold_1166_17
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13021..13824
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CF98_METED rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAX24296.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
scnpilot_cont_500_p_scaffold_1166_18
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14090..14524)
DNA (435bp) protein (145aa)
Putative transposase n=5 Tax=Rhizobium leguminosarum RepID=Q1M7Y5_RHIL3
transposase
Putative transposase {ECO:0000313|EMBL:CAK10392.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="
scnpilot_cont_500_p_scaffold_1166_19
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14767..15948)
DNA (1182bp) protein (394aa)
Arabinose efflux permease family protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX5_9BRAD rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIG62881.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhi
major facilitator transporter
scnpilot_cont_500_p_scaffold_1166_20
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15945..17330)
DNA (1386bp) protein (462aa)
Putative flavoprotein involved in K+ transport n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX4_9BRAD rbh
Putative flavoprotein involved in K+ transport {ECO:0000313|EMBL:EIG62880.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Br
hypothetical protein
scnpilot_cont_500_p_scaffold_1166_21
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17379..17702)
DNA (324bp) protein (108aa)
Putative transcriptional regulator n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX3_9BRAD
Putative transcriptional regulator {ECO:0000313|EMBL:EIG62879.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrh
transcriptional regulator
scnpilot_cont_500_p_scaffold_1166_22
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17899..18267
DNA (369bp) protein (123aa)
Transcriptional regulator, ArsR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCZ0_PELHB
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEQ52773.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="P
scnpilot_cont_500_p_scaffold_1166_23
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18345..18764
DNA (420bp) protein (140aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; N
arsenate reductase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034CC11E
arsC; arsenate reductase
scnpilot_cont_500_p_scaffold_1166_24
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18866..19621
DNA (756bp) protein (252aa)
NADPH-dependent FMN reductase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ29_SPHAL rbh
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ABF54243.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
scnpilot_cont_500_p_scaffold_1166_25
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19675..20688
DNA (1014bp) protein (338aa)
Monooxygenase n=1 Tax=Nitratireductor indicus C115 RepID=K2NKC6_9RHIZ rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KGJ22102.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" sourc
monooxygenase
scnpilot_cont_500_p_scaffold_1166_26
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20800..21630)
DNA (831bp) protein (277aa)
Phosphonate ABC transporter, inner membrane subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME6_XANP2 rbh
phosphonate ABC transporter inner membrane subunit
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABS69189.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" s
scnpilot_cont_500_p_scaffold_1166_27
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21618..22424)
DNA (807bp) protein (269aa)
Phosphonate ABC transporter, inner membrane subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME5_XANP2 rbh
phosphonate ABC transporter inner membrane subunit
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABS69188.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" s
scnpilot_cont_500_p_scaffold_1166_28
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22421..23278)
DNA (858bp) protein (286aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhiz
Phosphonate ABC transporter, ATPase subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME4_XANP2 rbh
phosphonate ABC transporter ATPase
scnpilot_cont_500_p_scaffold_1166_29
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23304..24272)
DNA (969bp) protein (323aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME3_XANP2 rbh
phosphonate ABC transporter periplasmic phosphonate-binding protein
Phosphonate ABC transporter, periplasmic phosphonate-binding protein {ECO:0000313|EMBL:ABS69186.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
scnpilot_cont_500_p_scaffold_1166_30
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24266..24982)
DNA (717bp) protein (239aa)
chemotaxis protein CheY n=1 Tax=Methylobacterium sp. 77 RepID=UPI000378DC33
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS65461.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthoba
Displaying items 1-30 of 33 in total

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