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scnpilot_cont_500_p_scaffold_5534

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_5534_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..282
DNA (282bp) protein (94aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CBU9_METED
putative plasmid stability protein
scnpilot_cont_500_p_scaffold_5534_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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279..1367
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CBU8_METED rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ39783.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
scnpilot_cont_500_p_scaffold_5534_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1381..2553
DNA (1173bp) protein (391aa)
Integrase/recombinase protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CBU7_METED rbh
Integrase {ECO:0000313|EMBL:KIZ39782.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
integrase/recombinase protein
scnpilot_cont_500_p_scaffold_5534_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2759..3982
DNA (1224bp) protein (408aa)
Plasmid partitioning protein RepA n=2 Tax=Oligotropha carboxidovorans RepID=B6JK23_OLICO rbh
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KIZ39781.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodo
repA2; replication protein A
scnpilot_cont_500_p_scaffold_5534_5
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3979..4962
DNA (984bp) protein (328aa)
Replication protein B n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CBU5_METED rbh
repB; replication protein B
Replication protein B {ECO:0000313|EMBL:CAX24242.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium
scnpilot_cont_500_p_scaffold_5534_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5156..6388
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8F1_AFIFE rbh
Replication initiation protein RepC {ECO:0000313|EMBL:KIZ48192.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodop
replication initiation protein RepC
scnpilot_cont_500_p_scaffold_5534_7
unknown

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6448..6669
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_5534_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6758..7273
DNA (516bp) protein (172aa)
Single-strand binding protein/Primosomal replication protein n n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFW4_NITHX
single-strand binding protein/primosomal replication protein n
Single-strand binding protein/Primosomal replication protein n {ECO:0000313|EMBL:ABE64883.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitro
scnpilot_cont_500_p_scaffold_5534_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7355..7840)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH34_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26845.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
helix-turn-helix domain-containing protein
scnpilot_cont_500_p_scaffold_5534_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7837..8148)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8ND63_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26846.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
helix-turn-helix domain-containing protein
scnpilot_cont_500_p_scaffold_5534_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8459..9136
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8F4_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26847.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
RepC-like protein
Displaying 11 items

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