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scnpilot_cont_500_p_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_15_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..304
DNA (303bp) protein (101aa)
Possible outer membrane protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUA5_9BRAD
Possible outer membrane protein {ECO:0000313|EMBL:EAQ36430.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter s
outer membrane protein
scnpilot_cont_500_p_scaffold_15_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

501..2654
DNA (2154bp) protein (718aa)
chemotaxis protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035EB8E3 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47168.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
methyl-accepting chemotaxis protein
scnpilot_cont_500_p_scaffold_15_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2922..3965
DNA (1044bp) protein (348aa)
DNA polymerase IV n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HHI5_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47167.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
putative metallo-hydrolase/oxidoreductase superfamily protein
scnpilot_cont_500_p_scaffold_15_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4152..5381
DNA (1230bp) protein (410aa)
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:000025
5-aminolevulinate synthase (EC:2.3.1.37)
5-aminolevulinate synthase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000371B9B5 rbh
scnpilot_cont_500_p_scaffold_15_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5418..6077)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3N3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34265.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
C4-dicarboxylate transport transcriptional regulatory protein DctR
scnpilot_cont_500_p_scaffold_15_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6262..9771
DNA (3510bp) protein (1170aa)
Periplasmic sensor hybrid histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20WZ1_RHOPB rbh
periplasmic sensor hybrid histidine kinase
Periplasmic sensor hybrid histidine kinase {ECO:0000313|EMBL:ABD90345.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
scnpilot_cont_500_p_scaffold_15_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9792..10475)
DNA (684bp) protein (228aa)
LuxR family transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031976F4 rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJC57988.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
two-component response regulator
scnpilot_cont_500_p_scaffold_15_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10935..12605
DNA (1671bp) protein (557aa)
major facilitator transporter n=1 Tax=Afipia birgiae RepID=UPI00037B42B6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34269.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
major facilitator transporter
scnpilot_cont_500_p_scaffold_15_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12732..13205)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037806BA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE99475.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
scnpilot_cont_500_p_scaffold_15_10
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13215..13784)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003613D82
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJC51565.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
scnpilot_cont_500_p_scaffold_15_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13885..14508)
DNA (624bp) protein (208aa)
DSBA oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FC8FEC rbh
DSBA oxidoreductase {ECO:0000313|EMBL:KIZ39834.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palus
hypothetical protein
scnpilot_cont_500_p_scaffold_15_12
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15270..16016
DNA (747bp) protein (249aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSZ2_9BRAD
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
scnpilot_cont_500_p_scaffold_15_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16068..16295
DNA (228bp) protein (76aa)
F0F1 ATP synthase subunit C (EC:3.6.3.14)
H+transporting two-sector ATPase C subunit n=9 Tax=Bradyrhizobiaceae RepID=B3QF36_RHOPT
H+-transporting two-sector ATPase, C subunit {ECO:0000313|EMBL:ABD09255.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sou
scnpilot_cont_500_p_scaffold_15_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16363..16917
DNA (555bp) protein (185aa)
ATP synthase subunit b n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VBR5_RHOPX
H+transporting two-sector ATPase subunit B/B'
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
scnpilot_cont_500_p_scaffold_15_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16922..17407
DNA (486bp) protein (162aa)
F0F1 ATP synthase subunit B n=1 Tax=Afipia birgiae RepID=UPI0002F04741
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
H+transporting two-sector ATPase subunit B/B'
scnpilot_cont_500_p_scaffold_15_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17488..18174)
DNA (687bp) protein (229aa)
Putative lipoprotein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V703_9BRAD
Putative lipoprotein {ECO:0000313|EMBL:EFI51013.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_15_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18343..18930)
DNA (588bp) protein (196aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20X17_RHOPB rbh
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABD90319.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
scnpilot_cont_500_p_scaffold_15_18
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19038..20321)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HHJ9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83946.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
mpp; protease
scnpilot_cont_500_p_scaffold_15_19
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20318..21736)
DNA (1419bp) protein (473aa)
Threonine synthase {ECO:0000313|EMBL:KJC57978.1}; EC=4.2.3.1 {ECO:0000313|EMBL:KJC57978.1};; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Brady
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NYM7_9BRAD rbh
scnpilot_cont_500_p_scaffold_15_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21878..22651)
DNA (774bp) protein (258aa)
Surfeit locus 1 family protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07HA7_RHOP5
Surfeit locus 1 family protein
Surfeit locus 1 family protein {ECO:0000313|EMBL:ABJ08677.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;
scnpilot_cont_500_p_scaffold_15_21
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22648..23037)
DNA (390bp) protein (130aa)
Peptide/nickel transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IIT9_9BRAD
Peptide/nickel transport system ATP-binding protein {ECO:0000313|EMBL:ERF83655.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.
hypothetical protein
scnpilot_cont_500_p_scaffold_15_22
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23123..23980)
DNA (858bp) protein (286aa)
Cytochrome c oxidase, subunit III n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT14_9BRAD rbh
Cytochrome B562 {ECO:0000313|EMBL:KJC51554.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP84
cytochrome C oxidase subunit III
scnpilot_cont_500_p_scaffold_15_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24056..24688)
DNA (633bp) protein (211aa)
Cytochrome c oxidase assembly protein CtaG n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=COXZ_NITHX
cytochrome C oxidase assembly protein
Cytochrome c oxidase assembly protein CtaG {ECO:0000255|HAMAP-Rule:MF_00155}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source
scnpilot_cont_500_p_scaffold_15_24
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24764..24925)
DNA (162bp) protein (54aa)
CoxF protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003635288
coxF; CoxF protein
CoxF protein {ECO:0000313|EMBL:BAL74013.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
scnpilot_cont_500_p_scaffold_15_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24944..25882)
DNA (939bp) protein (313aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
protoheme IX farnesyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002EDDC15 rbh
protoheme IX farnesyltransferase
scnpilot_cont_500_p_scaffold_15_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25984..27606)
DNA (1623bp) protein (541aa)
coxA; cytochrome C oxidase subunit I (EC:1.9.3.1)
cytochrome C oxidase subunit I n=1 Tax=Afipia birgiae RepID=UPI00031A8102 rbh
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:EKS34288.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATC
scnpilot_cont_500_p_scaffold_15_27
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27685..28524)
DNA (840bp) protein (280aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhi
cytochrome C oxidase subunit II n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036187A4 rbh
cytochrome C oxidase subunit II
scnpilot_cont_500_p_scaffold_15_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28938..29510
DNA (573bp) protein (191aa)
Invasion associated locus B n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IR88_RHOP2
invasion associated locus B
Invasion associated locus B {ECO:0000313|EMBL:ABD09272.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudom
scnpilot_cont_500_p_scaffold_15_29
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29664..31091
DNA (1428bp) protein (476aa)
Putative Zn-dependent protease-like protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YCG1_9BRAD rbh
tldD; protease TldD
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:EHR00455.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source
scnpilot_cont_500_p_scaffold_15_30
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31088..31858
DNA (771bp) protein (257aa)
peptidase S26A, signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
Signal peptidase I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRJ5_NITHX
Displaying items 1-30 of 292 in total

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