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scnpilot_cont_500_p_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 214 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_39_1
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..660
DNA (660bp) protein (220aa)
TRAG family protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZGK5_METPB
conjugal transfer coupling protein TraG
TRAG family protein {ECO:0000313|EMBL:ACB81239.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium p
scnpilot_cont_500_p_scaffold_39_2
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

671..1102
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZGK6_METPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB81240.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
scnpilot_cont_500_p_scaffold_39_3
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1137..1616)
DNA (480bp) protein (160aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3E840_GEOS4
activator of Hsp90 ATPase 1 family protein
ATPase {ECO:0000313|EMBL:KIL34415.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
scnpilot_cont_500_p_scaffold_39_4
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1784..2692
DNA (909bp) protein (303aa)
UPI0003CE8F56 related cluster n=1 Tax=unknown RepID=UPI0003CE8F56
Conjugal transfer protein TrbB {ECO:0000313|EMBL:ESX58343.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob
P-type conjugative transfer ATPase TrbB
scnpilot_cont_500_p_scaffold_39_5
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2689..3021
DNA (333bp) protein (111aa)
Type IV secretory pathway VirB2 component n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2K0_SPHJU
virB2; type IV secretory pathway VirB2 component
Type IV secretory pathway VirB2 component {ECO:0000313|EMBL:BAI96832.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source
scnpilot_cont_500_p_scaffold_39_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3021..3302
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCX3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37455.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
trbD; type IV secretory pathway TrbD component
scnpilot_cont_500_p_scaffold_39_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3317..5755
DNA (2439bp) protein (813aa)
VirB4 family type IV secretion/conjugal transfer ATPase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9G8_9BRAD
Type IV secretion system protein virB4 {ECO:0000313|EMBL:CEG10295.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
conjugal transfer ATPase TrbE
scnpilot_cont_500_p_scaffold_39_8
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5752..6510
DNA (759bp) protein (253aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGE7_9BRAD
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KIC60508.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundim
conjugal transfer protein TrbJ
scnpilot_cont_500_p_scaffold_39_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6521..6922
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4G6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG10297.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
scnpilot_cont_500_p_scaffold_39_10
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6924..8270
DNA (1347bp) protein (449aa)
P-type conjugative transfer protein TrbL n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7H7_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig172, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49891.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
conjugal transfer protein TrbL
scnpilot_cont_500_p_scaffold_39_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8273..8956
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCW8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37450.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
conjugal transfer protein TrbF rbh
scnpilot_cont_500_p_scaffold_39_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8953..10020
DNA (1068bp) protein (356aa)
P-type conjugative transfer protein TrbG n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9G5_9BRAD rbh
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EKS37449.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia br
P-type conjugative transfer protein TrbG
scnpilot_cont_500_p_scaffold_39_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10017..11273
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGE2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37448.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
conjugation TrbI family protein
scnpilot_cont_500_p_scaffold_39_14
bacterium YEK0313, Bacteria

Not on your lists

11275..11538
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D47387
Uncharacterized protein {ECO:0000313|EMBL:CEJ16016.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_39_15
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11510..12208)
DNA (699bp) protein (233aa)
Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6Z2_PARDP
Transcriptional regulator LysR {ECO:0000313|EMBL:GAJ30043.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_39_16
Pseudomonas sp. K-62, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12448..13266)
DNA (819bp) protein (273aa)
Organomercurial lyase n=1 Tax=Pseudomonas sp. K-62 RepID=I2FFZ5_9PSED rbh
Organomercurial lyase {ECO:0000313|EMBL:BAM13930.1}; TaxID=76885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. K-62.
mercuric reductase
scnpilot_cont_500_p_scaffold_39_17
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13300..14733)
DNA (1434bp) protein (478aa)
Mercuric reductase (Hg(II) reductase) MerA2 {ECO:0000313|EMBL:CCF22190.1}; EC=1.16.1.1 {ECO:0000313|EMBL:CCF22190.1};; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales
mercuric reductase n=1 Tax=Afipia birgiae RepID=UPI00030A2D0B rbh
merA; mercuric reductase (MerA)
scnpilot_cont_500_p_scaffold_39_18
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14730..14990)
DNA (261bp) protein (87aa)
Mercuric transport protein n=1 Tax=Pseudomonas sp. K-62 RepID=I2FFZ3_9PSED
Membrane transport protein MerF {ECO:0000313|EMBL:KGB53366.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing
hypothetical protein
scnpilot_cont_500_p_scaffold_39_19
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14995..15294)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEU2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF82175.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
putative mercuric transport protein, periplasmic
scnpilot_cont_500_p_scaffold_39_20
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15324..15716)
DNA (393bp) protein (131aa)
Mercuric transport protein (Mercury ion transport protein) n=1 Tax=Rhizobium sp. RepID=L0NMQ0_RHISP
Mercuric transport protein (Mercury ion transport protein) {ECO:0000313|EMBL:CCF22086.1}; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agr
mercuric transport protein
scnpilot_cont_500_p_scaffold_39_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15793..16236
DNA (444bp) protein (148aa)
Transcriptional regulator n=3 Tax=Proteobacteria RepID=G2I8R4_GLUXN
MerR family transcriptional regulator {ECO:0000313|EMBL:ETR77832.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
transcriptional regulator
scnpilot_cont_500_p_scaffold_39_22
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16337..17683
DNA (1347bp) protein (449aa)
Pyridine nucleotide-disulphide oxidoreductase dimerisation region n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJE8_XANP2 rbh
pyridine nucleotide-disulfide oxidoreductase dimerisation region
Pyridine nucleotide-disulphide oxidoreductase dimerisation region {ECO:0000313|EMBL:ABS68141.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xan
scnpilot_cont_500_p_scaffold_39_23
Pseudomonas sp. K-62, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18450..18857
DNA (408bp) protein (136aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Pseudomonas sp. K-62 RepID=I2FFZ0_9PSED
phosphoribosyl-AMP cyclohydrolase
scnpilot_cont_500_p_scaffold_39_24
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19389..20084)
DNA (696bp) protein (232aa)
Cytochrome c biogenesis protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSW7_9BRAD
Thiol:disulfide interchange protein DsbD {ECO:0000313|EMBL:CEG10186.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia feli
cytochrome c biogenesis protein, transmembrane region
scnpilot_cont_500_p_scaffold_39_25
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20086..20346)
DNA (261bp) protein (87aa)
Glutaredoxin-like protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSW8_9BRAD
Glutaredoxin-like protein {ECO:0000313|EMBL:EIG62874.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
thioredoxin/glutaredoxin
scnpilot_cont_500_p_scaffold_39_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20336..20767)
DNA (432bp) protein (144aa)
Transcriptional regulator, MerR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JKB5_OLICO
Copper export regulator {ECO:0000313|EMBL:CEG10188.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
MerR family transcriptional regulator
scnpilot_cont_500_p_scaffold_39_27
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20854..22113)
DNA (1260bp) protein (420aa)
MFS transporter n=2 Tax=Oligotropha carboxidovorans RepID=F8BR07_OLICM rbh
MFS transporter
MFS transporter {ECO:0000313|EMBL:AEI08251.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (
scnpilot_cont_500_p_scaffold_39_28
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22126..24579)
DNA (2454bp) protein (818aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ0_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig140, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53549.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
heavy metal translocating P-type ATPase
scnpilot_cont_500_p_scaffold_39_29
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24609..24824)
DNA (216bp) protein (72aa)
Copper chaperone n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX2_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig140, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53550.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
heavy metal transport/detoxification protein
scnpilot_cont_500_p_scaffold_39_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25385..25726)
DNA (342bp) protein (114aa)
merA; mercuric reductase (EC:1.16.1.1)
Mercuric reductase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKV3_AFIFE
Mercuric reductase {ECO:0000313|EMBL:EKS26823.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Displaying items 1-30 of 214 in total

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