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scnpilot_cont_500_p_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 221 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_43_1
unknown

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_43_2
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

331..1026
DNA (696bp) protein (232aa)
Transcriptional regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2YF95_9PROT
Transcriptional regulator {ECO:0000313|EMBL:EME71621.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetos
transcriptional regulator
scnpilot_cont_500_p_scaffold_43_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1183..1434
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVY5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35853.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
scnpilot_cont_500_p_scaffold_43_4
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1504..2274)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F996_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV13827.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_43_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2320..3036)
DNA (717bp) protein (239aa)
ABC transporter, branched-chain amino acid transport ATP-binding protein LivF n=2 Tax=Oligotropha carboxidovorans RepID=B6JJK4_OLICO rbh
livF1; ABC transporter, branched-chain amino acid transport ATP-binding protein LivF
ABC transporter, branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:AEI05364.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhiz
scnpilot_cont_500_p_scaffold_43_6
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3033..3806)
DNA (774bp) protein (258aa)
ABC transporter, branched-chain amino acid transport ATP-binding protein LivG n=2 Tax=Oligotropha carboxidovorans RepID=B6JJK5_OLICO rbh
livG1; branched-chain amino acid ABC transporter ATP-binding protein
ABC transporter, branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:AEI05363.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhiz
scnpilot_cont_500_p_scaffold_43_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3803..4945)
DNA (1143bp) protein (381aa)
Branched-chain amino acid transport permease n=2 Tax=Oligotropha carboxidovorans RepID=F8BKI9_OLICM rbh
ABC transporter permease
Branched-chain amino acid transport permease {ECO:0000313|EMBL:AEI05362.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="
scnpilot_cont_500_p_scaffold_43_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4948..5862)
DNA (915bp) protein (305aa)
ABC transporter permease n=2 Tax=Oligotropha carboxidovorans RepID=B6JJK7_OLICO rbh
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AEI05361.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxid
scnpilot_cont_500_p_scaffold_43_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5874..7034)
DNA (1161bp) protein (387aa)
ABC transporter substrate-binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJK8_OLICO rbh
ABC transporter substrate-binding protein rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AEI05360.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oli
scnpilot_cont_500_p_scaffold_43_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7512..8303
DNA (792bp) protein (264aa)
Transcriptional regulator, IclR family n=3 Tax=Oligotropha carboxidovorans RepID=F8BKI6_OLICM rbh
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEI05359.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligot
scnpilot_cont_500_p_scaffold_43_11
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8332..9228
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JJL0_OLICO rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEI05358.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligot
scnpilot_cont_500_p_scaffold_43_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9331..9948)
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJL1_OLICO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05357.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_cont_500_p_scaffold_43_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10178..11695
DNA (1518bp) protein (506aa)
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27) rbh
Methylmalonate semialdehyde dehydrogenase IolA {ECO:0000313|EMBL:AEI05356.1}; EC=1.2.1.18 {ECO:0000313|EMBL:AEI05356.1};; EC=1.2.1.27 {ECO:0000313|EMBL:AEI05356.1};; TaxID=504832 species="Bacteria; Pr
Methylmalonate semialdehyde dehydrogenase IolA n=2 Tax=Oligotropha carboxidovorans RepID=B6JJL3_OLICO rbh
scnpilot_cont_500_p_scaffold_43_14

Not on your lists

comp(12042..12440)
DNA (399bp) protein (133aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21B84_RHOPB
Marine sediment metagenome DNA, contig: S03H2_L07863 {ECO:0000313|EMBL:GAH31875.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
response regulator receiver domain-containing protein
scnpilot_cont_500_p_scaffold_43_15
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12695..13582
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IIW1_9BRAD
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:KJC58480.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhi
N-formylglutamate amidohydrolase
scnpilot_cont_500_p_scaffold_43_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14121..14996
DNA (876bp) protein (292aa)
histidinol-phosphate phosphatase (EC:3.1.3.25)
Histidinol-phosphate phosphatase, putative, inositol monophosphatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP60_NITHX
Inositol monophosphatase {ECO:0000313|EMBL:KIZ42986.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_cont_500_p_scaffold_43_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15115..16014)
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21B87_RHOPB rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD86349.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="R
scnpilot_cont_500_p_scaffold_43_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16103..16855
DNA (753bp) protein (251aa)
permease n=1 Tax=Afipia birgiae RepID=UPI0002F0F0CE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35263.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_cont_500_p_scaffold_43_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16858..17493)
DNA (636bp) protein (212aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q130B0_RHOPS rbh
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ABE41579.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhod
scnpilot_cont_500_p_scaffold_43_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17504..18448)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKS2_AFIFE rbh
alpha/beta hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EKS30917.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_cont_500_p_scaffold_43_21
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18695..19180
DNA (486bp) protein (162aa)
Small heat shock protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TYD7_9BRAD
Small heat shock protein {ECO:0000313|EMBL:CCE11475.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
small heat shock protein
scnpilot_cont_500_p_scaffold_43_22
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19389..20090)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000367DBAB
Uncharacterized protein {ECO:0000313|EMBL:KJC58169.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
scnpilot_cont_500_p_scaffold_43_23
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20571..25340
DNA (4770bp) protein (1590aa)
glutamate synthase (EC:1.4.7.1)
Glutamate synthase (NADPH/NADH) large chain n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GYA9_9BRAD rbh
Glutamate synthase (NADPH/NADH) large chain {ECO:0000313|EMBL:ERF82482.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sourc
scnpilot_cont_500_p_scaffold_43_24
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25483..26940
DNA (1458bp) protein (486aa)
gltD; glutamate synthase (EC:1.4.1.13)
NADH/NADPH-dependent glutamate synthase small subunit n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YKR5_9BRAD rbh
NADH/NADPH-dependent glutamate synthase small subunit {ECO:0000313|EMBL:EHR06015.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium
scnpilot_cont_500_p_scaffold_43_25
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27165..28766)
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003798D7D rbh
Bradyrhizobium elkanii strain UASWS1015 Contig167, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51081.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
scnpilot_cont_500_p_scaffold_43_26
bacterium YEK0313, Bacteria

Not on your lists

comp(28928..29839)
DNA (912bp) protein (304aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NBD0_RHOPA rbh
dapA; dihydrodipicolinate synthase
scnpilot_cont_500_p_scaffold_43_27
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30233..31663)
DNA (1431bp) protein (477aa)
Lytic murein transglycosylase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TS6_RHOP5 rbh
lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:ABJ04658.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;"
scnpilot_cont_500_p_scaffold_43_28
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31904..32773
DNA (870bp) protein (290aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1619232
UDP-glucose pyrophosphorylase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TT9_RHOP5
UTP-glucose-1-phosphate uridylyltransferase
scnpilot_cont_500_p_scaffold_43_29
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32937..33197
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TAG6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE03443.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_43_30
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33225..33764)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DDZ5_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL08141.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
Displaying items 1-30 of 221 in total

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