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scnpilot_cont_500_p_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_82_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..101
DNA (99bp) protein (33aa)
elongation factor Tu n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003452E3A
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacte
scnpilot_cont_500_p_scaffold_82_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


198..506
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NFL9_AFIFE
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseud
scnpilot_cont_500_p_scaffold_82_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


601..1323
DNA (723bp) protein (241aa)
50S ribosomal protein L3 n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=RL3_RHOP5 rbh
rplC; 50S ribosomal protein L3 rbh
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudo
scnpilot_cont_500_p_scaffold_82_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1325..1945
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RL4_RHOPB rbh
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000255|HAMAP-Rule:MF_01328}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudo
scnpilot_cont_500_p_scaffold_82_5
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1942..2238
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RL23_RHOPB
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source=
rplW; 50S ribosomal protein L23
scnpilot_cont_500_p_scaffold_82_6
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2252..3085
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RL2_NITHX rbh
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobiu
scnpilot_cont_500_p_scaffold_82_7
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3098..3376
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=5 Tax=Bradyrhizobiaceae RepID=RS19_BRADU
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
scnpilot_cont_500_p_scaffold_82_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3401..3787
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RL22_RHOPB
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000255|HAMAP-Rule:MF_01331}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseud
scnpilot_cont_500_p_scaffold_82_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3803..4501
DNA (699bp) protein (233aa)
30S ribosomal protein S3 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RS3_RHOPB rbh
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudo
scnpilot_cont_500_p_scaffold_82_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4536..4949
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=RL16_RHOP2
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000255|HAMAP-Rule:MF_01342}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseud
scnpilot_cont_500_p_scaffold_82_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4961..5170
DNA (210bp) protein (70aa)
50S ribosomal protein L29 n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VBW4_RHOPX
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseud
scnpilot_cont_500_p_scaffold_82_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5181..5429
DNA (249bp) protein (83aa)
30S ribosomal protein S17 n=2 Tax=Rhodopseudomonas palustris RepID=RS17_RHOP5
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000255|HAMAP-Rule:MF_01345}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseud
scnpilot_cont_500_p_scaffold_82_13
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5549..5917
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=4 Tax=Bradyrhizobiaceae RepID=RL14_NITHX
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" sourc
scnpilot_cont_500_p_scaffold_82_14
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5917..6231
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVT2_9BRAD
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp.
rplX; 50S ribosomal protein L24
scnpilot_cont_500_p_scaffold_82_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6224..6781
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RL5_RHOPB rbh
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudo
scnpilot_cont_500_p_scaffold_82_16
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6826..7131
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZVZ3_9BRAD
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizob
scnpilot_cont_500_p_scaffold_82_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7145..7543
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HKQ5_9BRAD
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
rpsH; 30S ribosomal protein S8
scnpilot_cont_500_p_scaffold_82_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7557..8090
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RL6_NITHX
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamb
scnpilot_cont_500_p_scaffold_82_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8102..8464
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RL18_NITHX
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
scnpilot_cont_500_p_scaffold_82_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8524..9096
DNA (573bp) protein (191aa)
30S ribosomal protein S5 n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=RS5_RHOP5 rbh
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudo
scnpilot_cont_500_p_scaffold_82_21
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9122..9313
DNA (192bp) protein (64aa)
50S ribosomal protein L30 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H5E5_9BRAD
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyr
rpmD; 50S ribosomal protein L30
scnpilot_cont_500_p_scaffold_82_22
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9430..9924
DNA (495bp) protein (165aa)
50S ribosomal protein L15 n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003640A40
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyr
rplO; 50S ribosomal protein L15
scnpilot_cont_500_p_scaffold_82_23
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10080..11411
DNA (1332bp) protein (444aa)
Protein translocase subunit SecY n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVT9_9BRAD rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobac
secY; preprotein translocase subunit SecY
scnpilot_cont_500_p_scaffold_82_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11408..12406
DNA (999bp) protein (333aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07KN9_RHOP5 rbh
scnpilot_cont_500_p_scaffold_82_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12562..12930
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HJL4_9BRAD
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; RRP-S13; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="R
rpsM; 30S ribosomal protein S13
scnpilot_cont_500_p_scaffold_82_26
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13042..13431
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=3 Tax=Bradyrhizobiaceae RepID=RS11_RHOPB
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
scnpilot_cont_500_p_scaffold_82_27
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13544..14575
DNA (1032bp) protein (344aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVU4_9BRAD rbh
scnpilot_cont_500_p_scaffold_82_28
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14693..15109
DNA (417bp) protein (139aa)
50S ribosomal protein L17 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAB9_9BRAD
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
rplQ; 50S ribosomal protein L17
scnpilot_cont_500_p_scaffold_82_29
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15597..16610)
DNA (1014bp) protein (338aa)
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W6X1_9BRAD rbh
Putative Zinc-type alcohol dehydrogenase-like protein {ECO:0000313|EMBL:KGJ70929.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium
zinc-binding dehydrogenase
scnpilot_cont_500_p_scaffold_82_30
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16809..17180
DNA (372bp) protein (124aa)
Transcriptional regulator, HxlR family n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QB15_RHOPT
MarR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ACF02138.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="R
Displaying items 1-30 of 140 in total

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