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scnpilot_cont_500_p_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_84_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..3088
DNA (3087bp) protein (1029aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B35274 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGT78752.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_84_2
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3169..5088
DNA (1920bp) protein (640aa)
type I secretion protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B75E5A
Type I secretion system ABC transporter, PrtD family {ECO:0000313|EMBL:EHR01488.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
Type I secretion system ATPase, PrtD
scnpilot_cont_500_p_scaffold_84_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5085..6401
DNA (1317bp) protein (439aa)
hemolysin secretion protein D n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034D575B rbh
Hemolysin secretion protein D {ECO:0000313|EMBL:KGT78751.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
HlyD family type I secretion membrane fusion protein
scnpilot_cont_500_p_scaffold_84_4
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6466..6726)
DNA (261bp) protein (87aa)
acyl carrier protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B56D48
Acyl carrier protein {ECO:0000313|EMBL:EJL50977.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source=
hypothetical protein
scnpilot_cont_500_p_scaffold_84_5
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6775..8001)
DNA (1227bp) protein (409aa)
diaminopimelate decarboxylase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3A624 rbh
Pyridoxal-dependent decarboxylase exosortase system type 1 protein {ECO:0000313|EMBL:EJZ06970.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;"
pyridoxal-dependent decarboxylase exosortase system type 1 protein
scnpilot_cont_500_p_scaffold_84_6
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7998..9569)
DNA (1572bp) protein (524aa)
acyl-CoA ligase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B38592 rbh
acetyl-coenzyme A synthetase
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:AGZ41471.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM
scnpilot_cont_500_p_scaffold_84_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9599..10468)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B497BB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ41472.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
scnpilot_cont_500_p_scaffold_84_8
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10533..11528)
DNA (996bp) protein (332aa)
Polypeptide N-acetylgalactosaminyltransferase 5 (EC:2.4.1.41)
Polypeptide N-acetylgalactosaminyltransferase 5 {ECO:0000313|EMBL:AEV83997.1}; EC=2.4.1.41 {ECO:0000313|EMBL:AEV83997.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonos
glycosyl transferase family 2 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B43D14 rbh
scnpilot_cont_500_p_scaffold_84_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11539..12366)
DNA (828bp) protein (276aa)
metallophosphoesterase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B6C136 rbh
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ABE63770.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgens
scnpilot_cont_500_p_scaffold_84_10
unknown

Not on your lists

12594..13262
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034536E9
scnpilot_cont_500_p_scaffold_84_11
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13395..18965)
DNA (5571bp) protein (1857aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RCC1_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB79227.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_84_12
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20085..20633
DNA (549bp) protein (183aa)
Acetyltransferase (Isoleucine patch superfamily) n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QB80_9BRAD
Putative transferase {ECO:0000313|EMBL:EJZ30856.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. C
putative transferase
scnpilot_cont_500_p_scaffold_84_13
unknown

Not on your lists

20801..21463
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B66609
scnpilot_cont_500_p_scaffold_84_14
unknown

Not on your lists

comp(22067..22174)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_84_15
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22321..22509)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DE75_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KGJ69955.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
hypothetical protein
scnpilot_cont_500_p_scaffold_84_16
unknown

Not on your lists

comp(23188..23343)
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_84_17
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23917..25104
DNA (1188bp) protein (396aa)
Putative Transporter n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TWB5_9BRAD
Putative Transporter {ECO:0000313|EMBL:CCE10753.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ST
transporter, putative
scnpilot_cont_500_p_scaffold_84_18
unknown

Not on your lists

25144..25596
DNA (453bp) protein (151aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_84_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25695..26834
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07PE4_RHOP5 rbh
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABJ06190.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rh
scnpilot_cont_500_p_scaffold_84_20
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26942..28102
DNA (1161bp) protein (387aa)
Citronellyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HDI5_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig175, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48937.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
acyl-CoA dehydrogenase
scnpilot_cont_500_p_scaffold_84_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28115..28765
DNA (651bp) protein (217aa)
Glutathione S-transferase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YC61_9BRAD rbh
Glutathione S-transferase {ECO:0000313|EMBL:KIZ39470.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
glutathione S-transferase
scnpilot_cont_500_p_scaffold_84_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28915..29736
DNA (822bp) protein (274aa)
Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138Q3_RHOPS rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KIZ39471.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhod
AraC family transcriptional regulator
scnpilot_cont_500_p_scaffold_84_23
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29844..30713
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002ED14F9 rbh
Iron complex transport system permease {ECO:0000313|EMBL:ERF82862.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Br
hypothetical protein
scnpilot_cont_500_p_scaffold_84_24
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30842..32437
DNA (1596bp) protein (532aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EGP06377.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EGP06377.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizo
Long-chain-fatty-acid--CoA ligase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QR10_9BRAD rbh
AMP-dependent synthetase and ligase
scnpilot_cont_500_p_scaffold_84_25
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32595..34154
DNA (1560bp) protein (520aa)
3-methylcrotonyl-CoA carboxylase subunit beta n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036A2737 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig175, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48933.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
3-methylcrotonoyl-CoA carboxylase subunit beta
scnpilot_cont_500_p_scaffold_84_26
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34151..36148
DNA (1998bp) protein (666aa)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IGN2_9BRAD rbh
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:ERF82865.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;
carbamoyl-phosphate synthase L chain, ATP-binding
scnpilot_cont_500_p_scaffold_84_27
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36161..36943
DNA (783bp) protein (261aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Putative carnitinyl-CoA dehydratase (Crotonobetainyl-CoA hydratase) {ECO:0000313|EMBL:CAL78971.1}; EC=4.2.1.- {ECO:0000313|EMBL:CAL78971.1};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaprote
Putative carnitinyl-CoA dehydratase (Crotonobetainyl-CoA hydratase) n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YYJ5_BRASO rbh
scnpilot_cont_500_p_scaffold_84_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36982..38526
DNA (1545bp) protein (515aa)
AMP-dependent synthetase and ligase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138P7_RHOPS rbh
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KIZ32842.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopse
AMP-dependent synthetase and ligase
scnpilot_cont_500_p_scaffold_84_29
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38610..39041)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20ZS9_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD89357.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_cont_500_p_scaffold_84_30
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39070..42039)
DNA (2970bp) protein (990aa)
lactate dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036C71DA rbh
Uncharacterized protein {ECO:0000313|EMBL:ERF85484.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
glycolate oxidase
Displaying items 1-30 of 98 in total

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