ggKbase home page

scnpilot_cont_500_p_scaffold_92

Search features with annotation key words

Displaying items 31-60 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_92_31
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32509..33327)
DNA (819bp) protein (273aa)
Carbon monoxide dehydrogenase medium chain n=1 Tax=Rhodovulum sp. PH10 RepID=J5PJC6_9RHOB
oxidoreductase medium subunit Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
molybdopterin dehydrogenase FAD-binding
scnpilot_cont_500_p_scaffold_92_32
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33324..35687)
DNA (2364bp) protein (788aa)
Putative carbon-monoxide dehydrogenase large subunit, coxL-like protein {ECO:0000313|EMBL:CCD03094.1}; EC=1.2.99.2 {ECO:0000313|EMBL:CCD03094.1};; TaxID=1064539 species="Bacteria; Proteobacteria; Alph
Putative carbon-monoxide dehydrogenase large subunit, coxL-like protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AYT5_AZOBR
putative carbon-monoxide dehydrogenase large subunit, coxL-like protein
scnpilot_cont_500_p_scaffold_92_33
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(35727..36440)
DNA (714bp) protein (238aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=2920410 bin=GWC2_Chloroflexi_49_37 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWC2_Chloroflexi_49_37_curated
ABC transporter-like protein
scnpilot_cont_500_p_scaffold_92_34
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36427..38250)
DNA (1824bp) protein (608aa)
ABC transporter, ATP-binding protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WW18_9DELT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEB32794.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" sourc
amino acid/amide ABC transporter membrane protein 2, HAAT family, amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
scnpilot_cont_500_p_scaffold_92_35
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(38254..39117)
DNA (864bp) protein (288aa)
Inner-membrane translocator id=1793829 bin=GWD2_Chloroflexi_49_16 species=unknown genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWC2_Chloroflexi_49_37_curated
inner-membrane translocator
scnpilot_cont_500_p_scaffold_92_36
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(39152..40234)
DNA (1083bp) protein (361aa)
Extracellular ligand-binding receptor id=2920419 bin=GWC2_Chloroflexi_49_37 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
extracellular ligand-binding receptor Tax=GWC2_Chloroflexi_49_37_curated
extracellular ligand-binding receptor
scnpilot_cont_500_p_scaffold_92_37
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40546..41829)
DNA (1284bp) protein (428aa)
Threonine synthase (EC:4.2.3.1) rbh
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00036DEFAE rbh
Threonine synthase {ECO:0000313|EMBL:KJS57343.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indig
scnpilot_cont_500_p_scaffold_92_38
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41894..42712
DNA (819bp) protein (273aa)
IclR family transcriptional regulator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TWZ5_TISMK
kdgR; IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:AFK57283.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tis
scnpilot_cont_500_p_scaffold_92_39
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42723..43919)
DNA (1197bp) protein (399aa)
Peptidase, M24 family {ECO:0000313|EMBL:EKX62058.1}; EC=3.4.-.- {ECO:0000313|EMBL:EKX62058.1};; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" sou
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000363715F rbh
hypothetical protein
scnpilot_cont_500_p_scaffold_92_40
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44156..45169
DNA (1014bp) protein (338aa)
Luciferase-like n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRP4_RHOP2 rbh
luciferase-like protein
Luciferase-like {ECO:0000313|EMBL:ABD09116.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustr
scnpilot_cont_500_p_scaffold_92_41
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45219..45881
DNA (663bp) protein (221aa)
NADPH-dependent F420 reductase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LSY1_9RHIZ
NADPH-dependent F420 reductase {ECO:0000313|EMBL:EKF20889.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratire
NADPH-dependent F420 reductase
scnpilot_cont_500_p_scaffold_92_42
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45920..46399
DNA (480bp) protein (160aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZY5_9RHIZ
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:KFC74325.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
endoribonuclease L-PSP
scnpilot_cont_500_p_scaffold_92_43
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46487..47872
DNA (1386bp) protein (462aa)
L-serine dehydratase 1 (EC:4.3.1.17)
L-serine dehydratase 1 {ECO:0000313|EMBL:ACL62675.1}; EC=4.3.1.17 {ECO:0000313|EMBL:ACL62675.1};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae;
L-serine dehydratase 1 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IW85_METNO rbh
scnpilot_cont_500_p_scaffold_92_44
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47932..48516)
DNA (585bp) protein (195aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacte
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Nitratireductor indicus C115 RepID=K2MXK7_9RHIZ
ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
scnpilot_cont_500_p_scaffold_92_45
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48557..49342)
DNA (786bp) protein (262aa)
Putative aliphatic sulfonates transport systempermease n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MGX9_9PROT
putative aliphatic sulfonates transport systempermease
ABC transporter permease {ECO:0000313|EMBL:KEO54869.1}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospir
scnpilot_cont_500_p_scaffold_92_46
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49339..50139)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000379609B
Nitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETW95724.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheo
ABC transporter
scnpilot_cont_500_p_scaffold_92_47
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50182..51201)
DNA (1020bp) protein (340aa)
Putative periplasmic-binding protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2KKX5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJV10329.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
putative ABC transporter substrate binding protein
scnpilot_cont_500_p_scaffold_92_48
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51308..52690)
DNA (1383bp) protein (461aa)
Decarboxylase UbiD {ECO:0000313|EMBL:EWY36876.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiire
UbiD decarboxylase family protein id=4827625 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
UbiD family decarboxylase
scnpilot_cont_500_p_scaffold_92_49
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52930..53421)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B479AC
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_92_50
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53563..54270
DNA (708bp) protein (236aa)
GntR family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2JBG3_9PROT
GntR family transcriptional regulator {ECO:0000313|EMBL:EXL01997.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquam
Transcriptional regulator, GntR family
scnpilot_cont_500_p_scaffold_92_51
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54583..55098
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TKX4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE07112.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_92_52
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55551..55853)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X093_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34350.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
scnpilot_cont_500_p_scaffold_92_53
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55983..56231)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUI7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36353.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
scnpilot_cont_500_p_scaffold_92_54
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56305..56676
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFQ3_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig152, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52987.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
scnpilot_cont_500_p_scaffold_92_55
unknown

Not on your lists

56750..56896
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_92_56
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57027..57356)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DQW3_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL06691.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
scnpilot_cont_500_p_scaffold_92_57
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57721..57987
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DQW4_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL06692.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
scnpilot_cont_500_p_scaffold_92_58
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57980..58276
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DQW5_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL06693.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
scnpilot_cont_500_p_scaffold_92_59
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58344..58622
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DQW6_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL06694.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
scnpilot_cont_500_p_scaffold_92_60
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59060..59380)
DNA (321bp) protein (107aa)
30S ribosomal protein S21 n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DQW7_BRAJP
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobi
30S ribosomal protein S21
Displaying items 31-60 of 169 in total

View Taxonomy