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scnpilot_cont_500_p_scaffold_92

Search features with annotation key words

Displaying items 121-150 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_92_121
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129905..130078)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NAB6_RHOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE26712.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
scnpilot_cont_500_p_scaffold_92_122
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130254..131363
DNA (1110bp) protein (370aa)
Exodeoxyribonuclease V n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07T03_RHOP5 rbh
exodeoxyribonuclease V
Exodeoxyribonuclease V {ECO:0000313|EMBL:ABJ04931.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_cont_500_p_scaffold_92_123
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131500..131895
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61572.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
scnpilot_cont_500_p_scaffold_92_124
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132194..132913
DNA (720bp) protein (240aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
methionine sulfoxide reductase A n=1 Tax=Bradyrhizobium japonicum RepID=UPI000369E7DC rbh
methionine sulfoxide reductase A
scnpilot_cont_500_p_scaffold_92_125
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132938..133351
DNA (414bp) protein (138aa)
methionine sulfoxide reductase B (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
methionine sulfoxide reductase B n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B3BA3E
scnpilot_cont_500_p_scaffold_92_126
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133492..133860
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000314C041
Uncharacterized protein {ECO:0000313|EMBL:KJC59608.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
scnpilot_cont_500_p_scaffold_92_127
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134268..134561
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP73_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61974.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
scnpilot_cont_500_p_scaffold_92_128
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134573..135088)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QGC6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ40204.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
scnpilot_cont_500_p_scaffold_92_129
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135151..136359)
DNA (1209bp) protein (403aa)
Diguanylate cyclase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07JL4_RHOP5 rbh
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ABJ07870.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas pal
scnpilot_cont_500_p_scaffold_92_130
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136596..137414)
DNA (819bp) protein (273aa)
Lytic murein transglycosylase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q131Q5_RHOPS rbh
lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:ACF00031.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;"
scnpilot_cont_500_p_scaffold_92_131
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137567..137872)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSZ9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETR79128.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
scnpilot_cont_500_p_scaffold_92_132
unknown

Not on your lists

comp(137869..138006)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_92_133
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138597..140570
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM25 RepID=J2XSH8_9PSED
Type IV pilus biogenesis/stability protein PilW {ECO:0000313|EMBL:KFB69031.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accu
hypothetical protein
scnpilot_cont_500_p_scaffold_92_134
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141076..141693
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPU9_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05692.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winograds
scnpilot_cont_500_p_scaffold_92_135
unknown

Not on your lists

comp(141796..141921)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_92_136
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142089..142322
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V305_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07186.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
scnpilot_cont_500_p_scaffold_92_137
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142400..144535)
DNA (2136bp) protein (712aa)
RNA polymerase sigma factor RpoD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJG3_NITHX rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyr
RNA polymerase sigma factor RpoD
scnpilot_cont_500_p_scaffold_92_138
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144774..146783)
DNA (2010bp) protein (670aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=316056 species="Bacteria; Proteobacter
DNA primase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AP6_RHOPB rbh
dnaG; DNA primase
scnpilot_cont_500_p_scaffold_92_139
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146946..147563
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P358_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35159.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
conserved hypothetical protein; putative isochorismatase family protein
scnpilot_cont_500_p_scaffold_92_140
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147682..148470
DNA (789bp) protein (263aa)
Acetoacetyl-CoA reductase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IHR1_9BRAD
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:ERF83265.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
N-formylglutamate amidohydrolase
scnpilot_cont_500_p_scaffold_92_141
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148474..149091)
DNA (618bp) protein (206aa)
Putative amino acid efflux protein, LysE family n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SDQ2_9BRAD rbh
Putative amino acid efflux protein, LysE family {ECO:0000313|EMBL:CCD92329.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" so
LysE family amino acid efflux protein
scnpilot_cont_500_p_scaffold_92_142
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149270..149584
DNA (315bp) protein (105aa)
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D5W5_BRAJP
transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AHY54457.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
scnpilot_cont_500_p_scaffold_92_143
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149577..150056
DNA (480bp) protein (160aa)
Regulatory protein, ArsR n=2 Tax=Oligotropha carboxidovorans RepID=B6JC54_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07522.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_cont_500_p_scaffold_92_144
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150062..150577
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SYP7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD99324.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_92_145
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150709..152319)
DNA (1611bp) protein (537aa)
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:EGP09888.1}; EC=6.2.1.1 {ECO:0000313|EMBL:EGP09888.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
AMP-dependent synthetase n=1 Tax=Afipia birgiae RepID=UPI000300EBF4 rbh
acetyl-coenzyme A synthetase
scnpilot_cont_500_p_scaffold_92_146
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152508..152963)
DNA (456bp) protein (152aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036EF8EE
Aspartyl-tRNA amidotransferase subunit B {ECO:0000313|EMBL:ETR78653.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia s
GatB/Yqey domain-containing protein
scnpilot_cont_500_p_scaffold_92_147
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153078..153866)
DNA (789bp) protein (263aa)
Alpha/beta hydrolase protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ISH7_RHOP2 rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KJC58377.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. L
alpha/beta hydrolase
scnpilot_cont_500_p_scaffold_92_148
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153942..155132
DNA (1191bp) protein (397aa)
carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q131N4_RHOPS rbh
scnpilot_cont_500_p_scaffold_92_149
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155271..155768
DNA (498bp) protein (166aa)
Phenylacetic acid degradation-related protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AQ7_RHOPB
phenylacetic acid degradation-like protein
Phenylacetic acid degradation-related protein {ECO:0000313|EMBL:ABD86529.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" so
scnpilot_cont_500_p_scaffold_92_150
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155830..156366
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TF84_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE05122.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
Displaying items 121-150 of 169 in total

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