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scnpilot_cont_500_p_scaffold_92_137

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 ASCG 12 / 38
Location: comp(142400..144535)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJG3_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 720.0
  • Bit_score: 1261
  • Evalue 0.0
  • rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyr similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 720.0
  • Bit_score: 1261
  • Evalue 0.0
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 720.0
  • Bit_score: 1261
  • Evalue 0.0

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2136
ATGGCCACCAAGGCGAAGACGGTGCAAGTCAAGGACAAGGAAAAAGACGACAAGGCCGCTGATGCGCCTGAGAAGGATGGCCCCGACGCGCCGTCCCCGCTGCTCGACCTGTCCGACGCTGCCGTCAAGAAGATGATCAAGCAGGCCAAGAAGCGCGGCTTCGTGACCTTCGATCAGCTCAACGAAGTGCTGCCGTCCGACCAGACCTCGCCGGAACAGATCGAAGACATCATGGCGATGCTGTCCGACATGGGCATCAACGTCTCGGAGAACGACGACTCCGACAGCGAAGAAGAGAGCAAGGAAGAGGCCGAGGAAGAGACCGACAACGAACTCGTCGAAGTCACCTCGAAGGCCGTCACCGAAACCAAGAAGTCCGAGCCGGGCGAGCGCACCGACGATCCGGTGCGGATGTATCTGCGCGAGATGGGCACCGTCGAGCTGCTGTCGCGCGAAGGCGAAATCGCCATCGCCAAGCGCATCGAGGCCGGTCGCGAAGCGATGATCGCCGGACTGTGCGAGAGCCCGCTGACGTTCCAGGCCATCATCATCTGGCGCGACGAACTCAACGAAGGCAAGATCTTCCTGCGCGACATCATTGACCTCGAGGCCACCTACGCCGGCCCCGATGCCAAGAACAACATGAACCCGGCGCTGATCGGCGGCCCGAACGGCGAAGGCCAGGCCGCTGAAGGTACCGAGGGCGAAGCCGCGCCGTCGCTGGTCGCGCCGCCCGCCGCGCCGCCATCGGCCACGCCGTTCCGCCCGGCGCCGCCGCGCGGCGCACCGGCCGCGGGTGACGGCGAGGAGAAGGATCCCGCCGAGTCCGCCGCCGAAGGCGACATGGACGACGACGAGTTCGAGAACCAGATGTCGCTCGCCGCCATCGAGGCCGAACTGAAGCCGAAGGTCGTCGAGATCTTCGACAAGATCGCCGAGAACTCCAAGAAGCTGCGCAAGCTGCAGGAACAGGACATCTCCAACCAGCTGCAGAACGAGACGCTGTCGCCGTCGCAGGAGCGCAAGTACAAGAAGCTCAAGGACGACATCATCGTCGAGGTGAAGTCGCTGCGGCTCAATCAGGCGCGCATCGATTCGCTGGTCGAGCAGCTCTACGACATTAACAAGCGCCTCGTCTCCTTCGAGGGCCGCCTGCTGCGGCTCGGCGACAGCCACGGCGTCGCGCGCGAGGACTTCCTGAAGAACTATCAGGGCTCCGAGCTCGATCCGCGCTGGCTCAACCGCGTCTCGAAACTCTCCGCCAAGGGCTGGAAGAATTTCGTCCATCACGAGAAGGACCGCATCAAGGAGCTGCGCGGCGAAATCCAGCAGCTCGCGGCGCTGACCGGCCTCGAGATCGGTGAATTCCGCAAGATCGTGCACGGCGTGCAGAAGGGCGAGCGCGAAGCCCGACAAGCCAAGAAGGAAATGGTCGAGGCCAACCTGCGCCTCGTCATCTCGATCGCCAAGAAATACACGAACCGCGGCCTGCAGTTCCTCGACCTGATTCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCGATAAATTCGAATATCGCCGCGGCTACAAGTTCTCGACCTATGCGACGTGGTGGATCCGGCAGGCGATCACCCGCTCGATCGCCGATCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAGACCATCAACAAGATCGTGCGCACCTCGCGCCAGATGCTCAACGAGATCGGCCGCGAGCCGACGCCGGAAGAGCTGGCCGAAAAGCTCGGCATGCCGCTGGAGAAGGTGCGCAAGGTTCTCAAGATCGCCAAGGAGCCGCTGTCGCTGGAAACCCCGGTGGGCGACGAGGAAGATTCGCACCTCGGCGATTTCATCGAGGACAAGAACGCCATCCTGCCGATCGACGCGGCGATCCAGTCCAACCTGCGCGAGACCACGACGCGCGTGCTGGCGTCGCTGACGCCGCGCGAGGAGCGCGTGCTGCGCATGCGCTTCGGCATCGGCATGAACACCGATCACACGCTGGAGGAAGTCGGCCAGCAGTTCTCGGTGACGCGCGAACGTATCCGGCAGATCGAGGCGAAGGCGCTGCGCAAGCTGAAGCACCCCTCGCGCTCGCGCAAGCTGCGGTCGTTCCTCGACAACTGA
PROTEIN sequence
Length: 712
MATKAKTVQVKDKEKDDKAADAPEKDGPDAPSPLLDLSDAAVKKMIKQAKKRGFVTFDQLNEVLPSDQTSPEQIEDIMAMLSDMGINVSENDDSDSEEESKEEAEEETDNELVEVTSKAVTETKKSEPGERTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQAIIIWRDELNEGKIFLRDIIDLEATYAGPDAKNNMNPALIGGPNGEGQAAEGTEGEAAPSLVAPPAAPPSATPFRPAPPRGAPAAGDGEEKDPAESAAEGDMDDDEFENQMSLAAIEAELKPKVVEIFDKIAENSKKLRKLQEQDISNQLQNETLSPSQERKYKKLKDDIIVEVKSLRLNQARIDSLVEQLYDINKRLVSFEGRLLRLGDSHGVAREDFLKNYQGSELDPRWLNRVSKLSAKGWKNFVHHEKDRIKELRGEIQQLAALTGLEIGEFRKIVHGVQKGEREARQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLKIAKEPLSLETPVGDEEDSHLGDFIEDKNAILPIDAAIQSNLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN*