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scnpilot_cont_500_p_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_101_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..2176
DNA (2175bp) protein (725aa)
Methionine synthase (B12-dependent) {ECO:0000313|EMBL:ABA03550.1}; EC=2.1.1.13 {ECO:0000313|EMBL:ABA03550.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
metH; B12-dependent methionine synthase (EC:2.1.1.13)
Methionine synthase (B12-dependent) n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVZ1_NITWN
scnpilot_cont_500_p_scaffold_101_2
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2209..3291)
DNA (1083bp) protein (361aa)
C4-dicarboxylate transporter/malic acid transport protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BMW3_OLICM rbh
C4-dicarboxylate transporter/malic acid transport protein
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:AEI07517.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotroph
scnpilot_cont_500_p_scaffold_101_3
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3384..3827)
DNA (444bp) protein (148aa)
Membrane protein implicated in regulation of membrane protease activity n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I0M6_9BRAD
Membrane protein implicated in regulation of membrane protease activity {ECO:0000313|EMBL:EJN11363.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
hypothetical protein
scnpilot_cont_500_p_scaffold_101_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3838..4836)
DNA (999bp) protein (333aa)
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IIY1_9BRAD rbh
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:ERF82489.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae
hypothetical protein
scnpilot_cont_500_p_scaffold_101_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4986..6014)
DNA (1029bp) protein (343aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
hemH; ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IFM5_9BRAD
scnpilot_cont_500_p_scaffold_101_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6075..7217)
DNA (1143bp) protein (381aa)
High-affinity nickel-transporter n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRD4_RHOP2 rbh
high-affinity nickel-transporter
High-affinity nickel-transporter {ECO:0000313|EMBL:ABD09226.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas
scnpilot_cont_500_p_scaffold_101_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7214..7849)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036C0D7F rbh
Bradyrhizobium elkanii strain UASWS1015 Contig166, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51269.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
scnpilot_cont_500_p_scaffold_101_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7933..10023)
DNA (2091bp) protein (697aa)
Peptidyl-dipeptidase Dcp, Metallo peptidase, MEROPS family M03A {ECO:0000313|EMBL:ABE64147.1}; EC=3.4.15.5 {ECO:0000313|EMBL:ABE64147.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteoba
peptidyl-dipeptidase Dcp (EC:3.4.15.5)
Peptidyl-dipeptidase Dcp, Metallo peptidase, MEROPS family M03A n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QI00_NITHX
scnpilot_cont_500_p_scaffold_101_9
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10150..10410
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030DB900
Uncharacterized protein {ECO:0000313|EMBL:CCD96637.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_101_10
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11094..12236
DNA (1143bp) protein (381aa)
ornithine decarboxylase n=1 Tax=Afipia birgiae RepID=UPI0002F05A2C rbh
Ornithine decarboxylase {ECO:0000313|EMBL:ERF82497.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
ornithine decarboxylase
scnpilot_cont_500_p_scaffold_101_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12379..12975
DNA (597bp) protein (199aa)
GCN5 family N-acetyltransferase n=1 Tax=Afipia birgiae RepID=UPI00030DB64B rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32766.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
acetyltransferase
scnpilot_cont_500_p_scaffold_101_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13026..13415
DNA (390bp) protein (130aa)
Endoribonuclease L-PSP n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QF58_RHOPT
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACE99492.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_cont_500_p_scaffold_101_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13735..14130
DNA (396bp) protein (132aa)
GreA/GreB family elongation factor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3I1_9BRAD
Regulator of nucleoside diphosphate kinase {ECO:0000313|EMBL:CEG06905.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia fe
GreA/GreB family elongation factor
scnpilot_cont_500_p_scaffold_101_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14370..15815
DNA (1446bp) protein (482aa)
Homospermidine synthase {ECO:0000313|EMBL:EFI52513.1}; EC=2.5.1.44 {ECO:0000313|EMBL:EFI52513.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
Homospermidine synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3I3_9BRAD rbh
homospermidine synthase
scnpilot_cont_500_p_scaffold_101_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15934..16275)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DD5688
Uncharacterized protein {ECO:0000313|EMBL:EKS41069.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
signal peptide protein
scnpilot_cont_500_p_scaffold_101_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16418..17134)
DNA (717bp) protein (239aa)
methyltransferase n=1 Tax=Afipia birgiae RepID=UPI0003187BB7 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32758.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
MgtC/SapB transporter
scnpilot_cont_500_p_scaffold_101_17
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17149..18168)
DNA (1020bp) protein (340aa)
Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IFP1_9BRAD rbh
Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE {ECO:0000313|EMBL:ERF82505.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;"
WD-40 repeat-containing protein
scnpilot_cont_500_p_scaffold_101_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18168..19265)
DNA (1098bp) protein (366aa)
Adenylate cyclase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HDG2_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig166, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51279.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
cobalamin synthesis protein P47K
scnpilot_cont_500_p_scaffold_101_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19314..20210)
DNA (897bp) protein (299aa)
Periplasmic solute binding protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VCE8_RHOPX rbh
periplasmic solute-binding protein
Periplasmic solute binding protein {ECO:0000313|EMBL:ADU42653.1}; Flags: Precursor;; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomon
scnpilot_cont_500_p_scaffold_101_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20222..21091)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NWB0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32754.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_cont_500_p_scaffold_101_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21096..21854)
DNA (759bp) protein (253aa)
ABC transporter n=1 Tax=Afipia birgiae RepID=UPI0002ED68D1 rbh
ABC transporter {ECO:0000313|EMBL:KIZ45685.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris
ABC transporter
scnpilot_cont_500_p_scaffold_101_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22232..22828)
DNA (597bp) protein (199aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; R
superoxide dismutase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E28111 rbh
superoxide dismutase, iron/manganese cofactor
scnpilot_cont_500_p_scaffold_101_23
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22935..24512)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SM98_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD95318.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_101_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24586..25827)
DNA (1242bp) protein (414aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZH6_RHOP2 rbh
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABD06384.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomo
scnpilot_cont_500_p_scaffold_101_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25941..26441
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NUF0_9BRAD
Acetyltransferase {ECO:0000313|EMBL:KIZ34475.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustr
hypothetical protein
scnpilot_cont_500_p_scaffold_101_26
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26549..27916
DNA (1368bp) protein (456aa)
cation transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E989FF rbh
Bradyrhizobium elkanii strain UASWS1015 Contig160, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52240.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
cation efflux system protein
scnpilot_cont_500_p_scaffold_101_27
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28150..28590
DNA (441bp) protein (147aa)
Blr7777 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CM0_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KJC57873.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
scnpilot_cont_500_p_scaffold_101_28
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28611..29765)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GFJ2_9BRAD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL79529.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
scnpilot_cont_500_p_scaffold_101_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30525..32102)
DNA (1578bp) protein (526aa)
long-chain-fatty-acid--CoA ligase protein (EC:6.2.1.3) rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PTP9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41723.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
scnpilot_cont_500_p_scaffold_101_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32133..32885)
DNA (753bp) protein (251aa)
fabG-2; 3-oxoacyl-(acyl-carrier-protein) reductase 2 (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGG6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41722.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
Displaying items 1-30 of 107 in total

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