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scnpilot_cont_500_p_scaffold_182

Search features with annotation key words

Displaying items 1-30 of 72 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_182_1
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(677..1705)
DNA (1029bp) protein (343aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
Ferrochelatase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL12_9GAMM
ferrochelatase
scnpilot_cont_500_p_scaffold_182_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1929..2189
DNA (261bp) protein (87aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL14_9GAMM
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
twin arginine-targeting protein translocase, TatA/E family
scnpilot_cont_500_p_scaffold_182_3
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2208..2558
DNA (351bp) protein (117aa)
Sec-independent protein translocase protein TatB n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L2X7_FRAAD
twin arginine-targeting protein translocase TatB
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteri
scnpilot_cont_500_p_scaffold_182_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2545..3330
DNA (786bp) protein (262aa)
Sec-independent protein translocase protein TatC n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL16_9GAMM
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
twin-arginine protein translocation system subunit TatC
scnpilot_cont_500_p_scaffold_182_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3373..4434
DNA (1062bp) protein (354aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1379159 species="Bacteria; Proteobacteria; Ga
DNA polymerase IV n=1 Tax=Dyella japonica RepID=UPI0002DD34EC
DNA polymerase IV
scnpilot_cont_500_p_scaffold_182_6
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4940..5956
DNA (1017bp) protein (339aa)
ABC transporter permease n=1 Tax=Dyella japonica RepID=UPI00030321FB
cysP; thiosulfate transporter; ABC superfamily, periplasmic and binding component; K02048 sulfate transport system substrate-binding protein Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
ABC transporter permease
scnpilot_cont_500_p_scaffold_182_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5980..6816
DNA (837bp) protein (279aa)
Sulfate ABC transporter permease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VV89_9GAMM
Sulfate ABC transporter permease {ECO:0000313|EMBL:EIL91130.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
sulfate transporter
scnpilot_cont_500_p_scaffold_182_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6813..7676
DNA (864bp) protein (288aa)
sulfate/thiosulfate transporter permease subunit n=1 Tax=Dyella japonica RepID=UPI000311E8FF
sulfate ABC transporter permease
Sulfate ABC transporter permease {ECO:0000313|EMBL:AHX13722.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangn
scnpilot_cont_500_p_scaffold_182_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7688..8851
DNA (1164bp) protein (388aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; Ta
ABC transporter n=1 Tax=Dyella japonica RepID=UPI0002E47D40
sulfate ABC transporter
scnpilot_cont_500_p_scaffold_182_10
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8866..10056
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A791E
Porin {ECO:0000313|EMBL:KJV35784.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
porin
scnpilot_cont_500_p_scaffold_182_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10096..11958)
DNA (1863bp) protein (621aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthom
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDY5_9GAMM
scnpilot_cont_500_p_scaffold_182_12
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11973..13361)
DNA (1389bp) protein (463aa)
dihydrolipoamide acetyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D3C162
Dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:EYR67621.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobac
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
scnpilot_cont_500_p_scaffold_182_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13543..14427
DNA (885bp) protein (295aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WW73_9GAMM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGG90519.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
scnpilot_cont_500_p_scaffold_182_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14429..18028
DNA (3600bp) protein (1200aa)
Aminopeptidase N n=1 Tax=Rhodanobacter denitrificans RepID=I4WW74_9GAMM
Aminopeptidase N {ECO:0000313|EMBL:AGG90520.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
aminopeptidase N
scnpilot_cont_500_p_scaffold_182_15
unknown

Not on your lists

comp(17947..18234)
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_182_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18307..19041)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KZ05_FRAAD
Uncharacterized protein {ECO:0000313|EMBL:GAN45443.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_cont_500_p_scaffold_182_17
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19121..19435)
DNA (315bp) protein (105aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B35EBD
antibiotic biosynthesis monooxygenase Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
antibiotic biosynthesis monooxygenase
scnpilot_cont_500_p_scaffold_182_18
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19432..19887)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037535CE
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_182_19
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19964..21040)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX36_CORCM
Drug/metabolite transporter permease {ECO:0000313|EMBL:KGM53706.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysob
hypothetical protein
scnpilot_cont_500_p_scaffold_182_20
unknown

Not on your lists

comp(21052..21240)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_182_21
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21351..22292
DNA (942bp) protein (314aa)
Biotin transporter BioY n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KT80_STEMA rbh
putative LysR family regulatory protein; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
LysR family regulatory protein
scnpilot_cont_500_p_scaffold_182_22
unknown

Not on your lists

comp(22294..23100)
DNA (807bp) protein (269aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_182_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23132..24040
DNA (909bp) protein (303aa)
Sel1 repeat protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFS6_9GAMM
Sel1 repeat protein
Sel1 repeat protein {ECO:0000313|EMBL:AGG89739.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
scnpilot_cont_500_p_scaffold_182_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24148..25029
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY78_9GAMM
Sel1 repeat protein
Sel1 repeat protein {ECO:0000313|EMBL:AGG89739.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
scnpilot_cont_500_p_scaffold_182_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25354..26949
DNA (1596bp) protein (532aa)
Major facilitator transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE10_9GAMM
Major facilitator transporter {ECO:0000313|EMBL:EIL97701.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
sugar phosphate permease
scnpilot_cont_500_p_scaffold_182_26
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27044..28384)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030435A2
Peptidase S41 {ECO:0000313|EMBL:KGI78955.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
C-terminal processing peptidase
scnpilot_cont_500_p_scaffold_182_27
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28496..29677)
DNA (1182bp) protein (394aa)
Membrane-bound metallopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZT8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI79000.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
peptidase M23
scnpilot_cont_500_p_scaffold_182_28
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29876..32266)
DNA (2391bp) protein (797aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
histidine kinase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3D265 rbh
scnpilot_cont_500_p_scaffold_182_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32263..33483)
DNA (1221bp) protein (407aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN45578.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
Cyclic diguanylate phosphodiesterase domain protein id=2460999 bin=GWF1_Xanthomonadales_69_6 species=Labrenzia alexandrii genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
response regulator receiver/diguanylate phosphodiesterase
scnpilot_cont_500_p_scaffold_182_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33564..34325
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTB5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02707.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
Displaying items 1-30 of 72 in total

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