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scnpilot_cont_500_p_scaffold_345

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_345_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1736)
DNA (1734bp) protein (578aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E87A19 rbh
TonB-dependent receptor {ECO:0000313|EMBL:AHY57267.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_345_2
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1854..5222)
DNA (3369bp) protein (1123aa)
Glycosyl hydrolase, family 31 n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L7R3_9GAMM rbh
Glycosyl hydrolase, family 31 {ECO:0000313|EMBL:EED38053.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotr
glycoside hydrolase family protein
scnpilot_cont_500_p_scaffold_345_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5535..6689
DNA (1155bp) protein (385aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas maltophilia RepID=J7USB0_STEMA rbh
agaS; sugar isomerase
Uncharacterized protein {ECO:0000313|EMBL:EJP78800.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
scnpilot_cont_500_p_scaffold_345_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6682..7620
DNA (939bp) protein (313aa)
ROK family transcriptional regulator n=1 Tax=Pseudomonas geniculata RepID=UPI00029B1837 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP78801.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
ROK family protein
scnpilot_cont_500_p_scaffold_345_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7637..8971
DNA (1335bp) protein (445aa)
Tagatose 6-phosphate kinase {ECO:0000313|EMBL:EZP44510.1}; EC=2.7.1.144 {ECO:0000313|EMBL:EZP44510.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomon
agaZ; tagatose 6-phosphate kinase (EC:2.7.1.144)
Tagatose 6-phosphate kinase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TGD3_STEMA rbh
scnpilot_cont_500_p_scaffold_345_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9000..9782
DNA (783bp) protein (261aa)
Transcriptional regulator, DeoR family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SM72_STRM5 rbh
Glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:CCP18816.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotr
DNA-binding transcriptional regulator AgaR
scnpilot_cont_500_p_scaffold_345_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10011..10418)
DNA (408bp) protein (136aa)
50S ribosomal protein L19 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EEC0CB
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Sten
LSU ribosomal protein L19P
scnpilot_cont_500_p_scaffold_345_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10551..11330)
DNA (780bp) protein (260aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N1)-methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F11E2D rbh
scnpilot_cont_500_p_scaffold_345_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11336..11851)
DNA (516bp) protein (172aa)
Ribosome maturation factor RimM n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U4C7_STEMA
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
rimM; 16S rRNA-processing protein RimM
scnpilot_cont_500_p_scaffold_345_10
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11890..12150)
DNA (261bp) protein (87aa)
30S ribosomal protein S16 n=1 Tax=Xanthomonas RepID=UPI000262A8B1
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas s
scnpilot_cont_500_p_scaffold_345_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12263..13057)
DNA (795bp) protein (265aa)
aminotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F301E5
Aminotransferase {ECO:0000313|EMBL:AHY59789.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
hypothetical protein
scnpilot_cont_500_p_scaffold_345_12
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13054..14124)
DNA (1071bp) protein (357aa)
Putative 2-nitropropane dioxygenase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FUB1_STRMK rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:AHY59790.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotroph
2-nitropropane dioxygenase
scnpilot_cont_500_p_scaffold_345_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14200..15579)
DNA (1380bp) protein (460aa)
signal recognition particle n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E2AA70 rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanth
ffh; signal recognition protein (signal recognition particle-like)
scnpilot_cont_500_p_scaffold_345_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15698..16492
DNA (795bp) protein (265aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003104F7D rbh
CcsA-like protein
Membrane protein {ECO:0000313|EMBL:KDE91841.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia
scnpilot_cont_500_p_scaffold_345_15
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16521..16991)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZ45_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED39641.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Sten
hypothetical protein
scnpilot_cont_500_p_scaffold_345_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17037..18413)
DNA (1377bp) protein (459aa)
DNA repair protein RadA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037B18E1 rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas mal
radA; DNA repair protein RadA
scnpilot_cont_500_p_scaffold_345_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18552..20609
DNA (2058bp) protein (686aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SP37_STRM5 rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ACF50849.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotro
diguanylate cyclase/phosphodiesterase
scnpilot_cont_500_p_scaffold_345_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20732..21073)
DNA (342bp) protein (114aa)
cyoD; cytochrome O ubiquinol oxidase subunit IV (EC:1.10.3.-)
Cytochrome O ubiquinol oxidase subunit IV n=3 Tax=Stenotrophomonas maltophilia RepID=I0KL40_STEMA
Stenotrophomonas maltophilia strain ZBG7B contig_23, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86793.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
scnpilot_cont_500_p_scaffold_345_19
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21073..21711)
DNA (639bp) protein (213aa)
cytochrome O ubiquinol oxidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036B94AD rbh
Cytochrome o ubiquinol oxidase subunit III {ECO:0000313|EMBL:AHY59800.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" so
cytochrome o ubiquinol oxidase subunit III
scnpilot_cont_500_p_scaffold_345_20
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21708..23708)
DNA (2001bp) protein (667aa)
cytochrome o ubiquinol oxidase subunit I (EC:1.9.3.1)
cytochrome O ubiquinol oxidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000373FDCD rbh
Cytochrome o ubiquinol oxidase subunit I {ECO:0000313|EMBL:AHY59801.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" sour
scnpilot_cont_500_p_scaffold_345_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23711..24751)
DNA (1041bp) protein (347aa)
ubiquinol oxidase subunit II n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037E48E2 rbh
ubiquinol oxidase subunit II
Ubiquinol oxidase, subunit II {ECO:0000313|EMBL:ACF50845.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas
scnpilot_cont_500_p_scaffold_345_22
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25032..27938)
DNA (2907bp) protein (969aa)
Autotransporter beta-domain protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZ58_9GAMM rbh
Autotransporter beta-domain protein {ECO:0000313|EMBL:EED39539.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="S
outer membrane autotransporter barrel domain-containing protein
scnpilot_cont_500_p_scaffold_345_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28087..28716
DNA (630bp) protein (210aa)
RNA polymerase subunit sigma-24 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036222A5
RNA polymerase sigma factor nccH {ECO:0000313|EMBL:CCP15388.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomo
RNA polymerase sigma factor
scnpilot_cont_500_p_scaffold_345_24
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28713..29690
DNA (978bp) protein (326aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037B2400 rbh
Putative transmembrane sensor {ECO:0000313|EMBL:EZP46023.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenot
anti-FecI sigma factor FecR
scnpilot_cont_500_p_scaffold_345_25
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29699..32461
DNA (2763bp) protein (921aa)
TonB-dependent receptor plug n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2A0_STEMA rbh
TonB-dependent receptor {ECO:0000313|EMBL:EZP46022.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophom
TonB-dependent receptor plug
scnpilot_cont_500_p_scaffold_345_26
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32638..33588)
DNA (951bp) protein (317aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T1X8_XANCT rbh
scnpilot_cont_500_p_scaffold_345_27
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33648..34160)
DNA (513bp) protein (171aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=3 Tax=Xanthomonas campestris pv. campestris RepID=LSPA_XANC8 rbh
lspA; lipoprotein signal peptidase
scnpilot_cont_500_p_scaffold_345_28
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34235..37015)
DNA (2781bp) protein (927aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
isoleucyl-tRNA synthetase (EC:6.1.1.5)
isoleucyl-tRNA synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D535F5 rbh
scnpilot_cont_500_p_scaffold_345_29
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37073..38080)
DNA (1008bp) protein (336aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=863365 species="Bacteria; Proteobacter
Riboflavin kinase n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZFL3_9XANT rbh
riboflavin kinase
scnpilot_cont_500_p_scaffold_345_30
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38163..39755)
DNA (1593bp) protein (531aa)
Virulence factor n=2 Tax=Xanthomonas RepID=G2LWE4_9XANT rbh
mviN; virulence factor
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomo
Displaying items 1-30 of 69 in total

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