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scnpilot_cont_500_p_scaffold_457

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Displaying items 1-30 of 72 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_457_1
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50..1042
DNA (993bp) protein (331aa)
P-type conjugative transfer protein TrbG n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WYJ0_PSEDE rbh
P-type conjugative transfer protein TrbG
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:AGI23807.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="
scnpilot_cont_500_p_scaffold_457_2
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1045..2322
DNA (1278bp) protein (426aa)
conjugative transfer protein TrbI n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002FE270F rbh
Uncharacterized protein {ECO:0000313|EMBL:EKB27230.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SS
conjugation TrbI family protein
scnpilot_cont_500_p_scaffold_457_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2319..2564
DNA (246bp) protein (82aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=A0KUQ7_SHESA
Hypothetical protein
Conjugal transfer protein {ECO:0000313|EMBL:EVT87449.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer
scnpilot_cont_500_p_scaffold_457_4
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2573..3958)
DNA (1386bp) protein (462aa)
Periplasmic sensor signal transduction histidine kinase; K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Ralstonia sp. PBA RepID=I9W4X4_9RALS rbh
Periplasmic sensor signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_457_5
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3955..4614)
DNA (660bp) protein (220aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3H9_POLGS rbh
Two component transcriptional regulator, winged helix family; K02483 two-component system, OmpR family, response regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
Two component transcriptional regulator, winged helix family
scnpilot_cont_500_p_scaffold_457_6
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4746..5138
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9W4T9_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ03472.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_457_7
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5149..6417
DNA (1269bp) protein (423aa)
Oxidoreductase, flavocytochrome subunit n=1 Tax=Ralstonia sp. PBA RepID=I9BUT4_9RALS rbh
Oxidoreductase, flavocytochrome subunit {ECO:0000313|EMBL:EIZ03471.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralst
oxidoreductase, flavocytochrome subunit
scnpilot_cont_500_p_scaffold_457_8
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6469..6939
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9KTA4_9RALS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_457_9
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6961..9168
DNA (2208bp) protein (736aa)
oxidoreductase FAD-binding subunit; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
Oxidoreductase, FAD-binding, putative n=1 Tax=Ralstonia sp. PBA RepID=I9W4W9_9RALS rbh
oxidoreductase FAD-binding subunit
scnpilot_cont_500_p_scaffold_457_10
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9149..10126
DNA (978bp) protein (326aa)
ApbE-like lipoprotein n=1 Tax=Ralstonia sp. PBA RepID=I9BU91_9RALS rbh
ApbE-like lipoprotein; K03734 thiamine biosynthesis lipoprotein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
ApbE-like lipoprotein
scnpilot_cont_500_p_scaffold_457_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10563..10886
DNA (324bp) protein (108aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=7 Tax=Stenotrophomonas RepID=G0JVK4_STEMA
ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:AEM50890.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; S
scnpilot_cont_500_p_scaffold_457_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11021..11530)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Xanthomonadaceae RepID=UPI00029B3B2F
Uncharacterized protein {ECO:0000313|EMBL:EZP43274.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophom
hypothetical protein
scnpilot_cont_500_p_scaffold_457_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11562..12242)
DNA (681bp) protein (227aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
dihydrodipicolinate synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F06BF5 rbh
scnpilot_cont_500_p_scaffold_457_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12422..13030
DNA (609bp) protein (203aa)
Glycine cleavage system transcriptional repressor n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CSK3_STEMA rbh
glycine cleavage system transcriptional repressor
Putative glycine cleavage system transcriptional repressor {ECO:0000313|EMBL:CAQ45293.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenot
scnpilot_cont_500_p_scaffold_457_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13109..13588
DNA (480bp) protein (160aa)
peroxiredoxin n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EF28C2
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEM50886.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
scnpilot_cont_500_p_scaffold_457_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13670..15070
DNA (1401bp) protein (467aa)
Predicted ATPase related to phosphate starvation-inducible protein PhoH n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KMG4_STEMA rbh
ATPase related to phosphate starvation-inducible protein PhoH
Predicted ATPase related to phosphate starvation-inducible protein PhoH {ECO:0000313|EMBL:CCH12253.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
scnpilot_cont_500_p_scaffold_457_17
unknown

Not on your lists

15113..15343
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_457_18
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15372..15866
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031C88A4
Uncharacterized protein {ECO:0000313|EMBL:AHY59472.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
hypothetical protein
scnpilot_cont_500_p_scaffold_457_19
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15892..16566
DNA (675bp) protein (225aa)
membrane protein n=1 Tax=Xanthomonadaceae RepID=UPI00029B10E2 rbh
Membrane protein {ECO:0000313|EMBL:AHY59473.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
hypothetical protein
scnpilot_cont_500_p_scaffold_457_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16602..17411
DNA (810bp) protein (270aa)
thiD; phosphomethylpyrimidine kinase (EC:2.7.4.7)
phosphomethylpyrimidine kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003128CDB rbh
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EJP76950.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomona
scnpilot_cont_500_p_scaffold_457_21
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17408..18250
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E2FF43 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC47437.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchar
scnpilot_cont_500_p_scaffold_457_22
unknown

Not on your lists

comp(18421..18651)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_457_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18749..21445)
DNA (2697bp) protein (899aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:CCH13247.1}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:CCH13247.1};; TaxID=1163399 species="Bacteria; Prote
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KQA7_STEMA rbh
scnpilot_cont_500_p_scaffold_457_24
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21680..22744)
DNA (1065bp) protein (355aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:00
Methylthioribose-1-phosphate isomerase n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122 RepID=D4SWI9_9XANT rbh
putative initiation factor 2B_alpha/beta/delta
scnpilot_cont_500_p_scaffold_457_25
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22768..23463)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=G7TAQ0_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KGR58739.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicol
hypothetical protein
scnpilot_cont_500_p_scaffold_457_26
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23646..24590)
DNA (945bp) protein (315aa)
Elongation factor P--(R)-beta-lysine ligase {ECO:0000256|SAAS:SAAS00088906}; EC=6.3.1.- {ECO:0000256|SAAS:SAAS00088909};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomon
lysine--tRNA ligase (EC:6.1.1.6)
lysyl-tRNA synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DB00BB rbh
scnpilot_cont_500_p_scaffold_457_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24587..25063)
DNA (477bp) protein (159aa)
GCN5 family acetyltransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AB54
Stenotrophomonas maltophilia strain ZBG7B contig_43, whole genome shotgun sequence {ECO:0000313|EMBL:KIP85971.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
GCN5 family acetyltransferase
scnpilot_cont_500_p_scaffold_457_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25060..27540)
DNA (2481bp) protein (827aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1235458 species="Bacteri
DNA ligase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TV33_STEMA rbh
ligA; NAD-dependent DNA ligase LigA
scnpilot_cont_500_p_scaffold_457_29
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27647..28381)
DNA (735bp) protein (245aa)
cell division protein ZipA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F94A53 rbh
Cell division protein ZipA {ECO:0000256|RuleBase:RU003612}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotro
zipA; cell division protein ZipA
scnpilot_cont_500_p_scaffold_457_30
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28428..31931)
DNA (3504bp) protein (1168aa)
chromosome partitioning protein Smc n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DF4A3D rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="
chromosome segregation protein SMC
Displaying items 1-30 of 72 in total

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