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scnpilot_cont_500_p_scaffold_491

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_491_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..961)
DNA (960bp) protein (320aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Xanthomonas sacchari RepID=UPI000263036A rbh
scnpilot_cont_500_p_scaffold_491_2
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(958..2055)
DNA (1098bp) protein (366aa)
threonine dehydratase (EC:4.3.1.19)
Strain LMCP11 contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26595.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KIQ26595.1};; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xant
Threonine dehydratase catabolic n=3 Tax=Xanthomonas campestris RepID=G0CF47_XANCA rbh
scnpilot_cont_500_p_scaffold_491_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2167..2424)
DNA (258bp) protein (86aa)
Acetolactate synthase isozyme II small subunit n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SI65_STRM5
Acetolactate synthase {ECO:0000313|EMBL:AHY57802.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomona
acetolactate synthase isozyme II small subunit
scnpilot_cont_500_p_scaffold_491_4
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2408..3958)
DNA (1551bp) protein (517aa)
Acetolactate synthase catalytic subunit {ECO:0000313|EMBL:KHM94434.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KHM94434.1};; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
acetolactate synthase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A3EE34
ilvB; acetolactate synthase large subunit
scnpilot_cont_500_p_scaffold_491_5
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4004..4978)
DNA (975bp) protein (325aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ketol-acid reductoisomerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EF84F4 rbh
ketol-acid reductoisomerase rbh
scnpilot_cont_500_p_scaffold_491_6
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5807..6625
DNA (819bp) protein (273aa)
Adenylate/guanylate cyclase family protein,putative transcriptional regulator n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YY65_9GAMM
transcriptional activator domain protein
Transcriptional activator domain protein {ECO:0000313|EMBL:BAO30161.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulf
scnpilot_cont_500_p_scaffold_491_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6821..8158)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00036D86C5
Uncharacterized protein {ECO:0000313|EMBL:EER60641.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii
hypothetical protein
scnpilot_cont_500_p_scaffold_491_8
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8155..12393)
DNA (4239bp) protein (1413aa)
Putative membrane protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QM64_BORBO
hypothetical protein
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KDD62302.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
scnpilot_cont_500_p_scaffold_491_9
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12438..13190)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003774178
hypothetical protein
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:KCV60263.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordet
scnpilot_cont_500_p_scaffold_491_10
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13202..14458)
DNA (1257bp) protein (419aa)
Putative type II secretion system protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QFA6_BORBO rbh
type II secretion system protein
Type II secretion system protein F {ECO:0000313|EMBL:KCV63162.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
scnpilot_cont_500_p_scaffold_491_11
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14455..16161)
DNA (1707bp) protein (569aa)
Putative type II secretion system protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MEB4_BORPB rbh
Type II/IV secretion system protein {ECO:0000313|EMBL:KCV63161.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetell
type II secretion system protein
scnpilot_cont_500_p_scaffold_491_12
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16148..17590)
DNA (1443bp) protein (481aa)
Putative type II secretion system protein n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MP29_BORBM rbh
General secretion pathway protein A family protein {ECO:0000313|EMBL:KDD62290.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" so
type II secretion system protein rbh
scnpilot_cont_500_p_scaffold_491_13
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17587..18537)
DNA (951bp) protein (317aa)
Putative membrane protein n=4 Tax=Bordetella bronchiseptica RepID=Q7WPA2_BORBR
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCN21556.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchis
scnpilot_cont_500_p_scaffold_491_14
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18534..20288)
DNA (1755bp) protein (585aa)
Putative type II secretion system protein n=3 Tax=Bordetella bronchiseptica RepID=K0MRV5_BORBM rbh
type II secretion system protein
Pilus (MSHA type) biogenesis protein MshL {ECO:0000313|EMBL:KDD62295.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bor
scnpilot_cont_500_p_scaffold_491_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20343..21131)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003678A67
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_491_16
unknown

Not on your lists

comp(21133..21735)
DNA (603bp) protein (201aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_491_17
unknown

Not on your lists

comp(21732..22250)
DNA (519bp) protein (173aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_491_18
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22247..23647)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=2 Tax=Bordetella bronchiseptica RepID=K0MSQ2_BORBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCN21561.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchisep
scnpilot_cont_500_p_scaffold_491_19
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23644..24183)
DNA (540bp) protein (180aa)
Putative exported protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4TW70_BORBO
Putative exported protein {ECO:0000313|EMBL:CCN21562.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchis
hypothetical protein
scnpilot_cont_500_p_scaffold_491_20
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24188..25012)
DNA (825bp) protein (275aa)
Putative type II secretion system protein n=7 Tax=Bordetella RepID=K0MDK9_BORPB rbh
type II secretion system protein
Putative type II secretion system protein {ECO:0000313|EMBL:CCJ48076.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bor
scnpilot_cont_500_p_scaffold_491_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25285..26988
DNA (1704bp) protein (568aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L5P9_STEMA rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:EQM87332.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas mal
scnpilot_cont_500_p_scaffold_491_22
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27022..27723)
DNA (702bp) protein (234aa)
Choline/carnitine/betaine transporter n=2 Tax=Stenotrophomonas maltophilia RepID=G0K1Z4_STEMA
Putative glycine betaine transporter 2 {ECO:0000313|EMBL:EZP44721.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" sourc
opuD2; glycine betaine transporter 2
scnpilot_cont_500_p_scaffold_491_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27738..28592)
DNA (855bp) protein (285aa)
Choline/carnitine/betaine transporter n=2 Tax=Stenotrophomonas maltophilia RepID=G0K1Z4_STEMA rbh
choline/carnitine/betaine transporter
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:AEM52676.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotro
scnpilot_cont_500_p_scaffold_491_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29042..30919
DNA (1878bp) protein (626aa)
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short
Phosphomethylpyrimidine synthase n=2 Tax=Stenotrophomonas maltophilia RepID=J7SYG9_STEMA rbh
thiC; thiamine biosynthesis protein ThiC
scnpilot_cont_500_p_scaffold_491_25
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31418..33745
DNA (2328bp) protein (776aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EFC7E6 rbh
TolB protein {ECO:0000313|EMBL:EZP44718.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RI
cadC; transcriptional activator cadC
scnpilot_cont_500_p_scaffold_491_26
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33858..34763
DNA (906bp) protein (302aa)
AraC family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F20B8A rbh
Transcriptional regulator {ECO:0000313|EMBL:EED38811.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotropho
hth transcriptional regulator
scnpilot_cont_500_p_scaffold_491_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34810..37650
DNA (2841bp) protein (947aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSI0_STEMA rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:CCH14022.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
scnpilot_cont_500_p_scaffold_491_28
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37905..39110)
DNA (1206bp) protein (402aa)
chemotaxis protein CheY n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EFBAEF rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KCX00961.1}; TaxID=69929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboric
two-component system response regulator
scnpilot_cont_500_p_scaffold_491_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39180..39716)
DNA (537bp) protein (179aa)
inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1183154 species="Ba
Inorganic pyrophosphatase n=9 Tax=Stenotrophomonas RepID=B2FT63_STRMK rbh
scnpilot_cont_500_p_scaffold_491_30
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39982..42027)
DNA (2046bp) protein (682aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
pyrophosphate-energized proton pump (EC:3.6.1.1)
pyrophosphatase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031C3CFA rbh
Displaying items 1-30 of 94 in total

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