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scnpilot_cont_500_p_scaffold_895

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_895_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
oligoribonuclease (EC:3.1.-.-)
Oligoribonuclease n=2 Tax=Xanthomonas campestris RepID=B0RSD1_XANCB
scnpilot_cont_500_p_scaffold_895_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201..713)
DNA (513bp) protein (171aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadal
tRNA-specific adenosine-34 deaminase (EC:3.5.4.-)
Deoxycytidylate deaminase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KHW4_STEMA
scnpilot_cont_500_p_scaffold_895_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(710..1174)
DNA (465bp) protein (155aa)
Putative acetyltransferase (GNAT) family protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FJF6_STRMK
acetyltransferase (GNAT) family protein
Uncharacterized protein {ECO:0000313|EMBL:EJP79809.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
scnpilot_cont_500_p_scaffold_895_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1397..2389)
DNA (993bp) protein (331aa)
Transcriptional regulator, LysR family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SNK7_STRM5 rbh
Stenotrophomonas maltophilia strain ZBG7B contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87304.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_895_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2564..3844)
DNA (1281bp) protein (427aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
serS; seryl-tRNA synthetase (EC:6.1.1.11)
seryl-tRNA synthetase n=1 Tax=Pseudomonas geniculata RepID=UPI00029B1B7A rbh
scnpilot_cont_500_p_scaffold_895_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3972..4619
DNA (648bp) protein (216aa)
energry transducer TonB n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DC4CBC
Energy transducer TonB {ECO:0000313|EMBL:AHY58618.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomon
outer membrane transport energization protein TonB
scnpilot_cont_500_p_scaffold_895_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4750..5295
DNA (546bp) protein (182aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E9CC75
TonB-dependent receptor {ECO:0000313|EMBL:AHY58617.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
TonB dependent receptor protein
scnpilot_cont_500_p_scaffold_895_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5365..6675)
DNA (1311bp) protein (437aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F74AB1 rbh
3-phosphoshikimate 1-carboxyvinyltransferase rbh
scnpilot_cont_500_p_scaffold_895_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6829..7977)
DNA (1149bp) protein (383aa)
Chorismate mutase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SP44_STRM5 rbh
chorismate mutase
Chorismate mutase {ECO:0000313|EMBL:ACF52239.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotroph
scnpilot_cont_500_p_scaffold_895_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8033..9118)
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine
phosphoserine aminotransferase (EC:2.6.1.52)
MFS transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031CCD7A rbh
scnpilot_cont_500_p_scaffold_895_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9260..10063)
DNA (804bp) protein (268aa)
signal peptide protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003016305 rbh
Signal peptide protein {ECO:0000313|EMBL:KDE88662.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltop
FHA domain-containing protein
scnpilot_cont_500_p_scaffold_895_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10183..10458
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7UVH3_STEMA
Putative polyhydroxyalkanoic acid system protein {ECO:0000313|EMBL:EZP45493.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomona
hypothetical protein
scnpilot_cont_500_p_scaffold_895_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10550..11011
DNA (462bp) protein (154aa)
poly(hydroxyalkanoate) granule-associated protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FB2986
Poly(Hydroxyalkanoate) granule-associated protein {ECO:0000313|EMBL:AHY58611.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomona
poly(hydroxyalkanoate) granule-associated protein
scnpilot_cont_500_p_scaffold_895_14
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11209..12615)
DNA (1407bp) protein (469aa)
Aldehyde dehydrogenase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H9Q8_XANCT rbh
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas tran
aldehyde dehydrogenase
scnpilot_cont_500_p_scaffold_895_15
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12738..15227)
DNA (2490bp) protein (830aa)
TonB-dependent receptor n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5C34D rbh
TonB-denpendent receptor {ECO:0000313|EMBL:EYR67756.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsic
TonB dependent receptor
scnpilot_cont_500_p_scaffold_895_16
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15304..16428)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W320_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR67757.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
scnpilot_cont_500_p_scaffold_895_17
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16439..17656)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZIZ9_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR67758.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
scnpilot_cont_500_p_scaffold_895_18
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17778..18815
DNA (1038bp) protein (346aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4W3D5_9GAMM rbh
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AHX14886.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella j
scnpilot_cont_500_p_scaffold_895_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18936..20450)
DNA (1515bp) protein (505aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
Glucose-6-phosphate isomerase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JVL2_STEMA rbh
scnpilot_cont_500_p_scaffold_895_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20447..20827)
DNA (381bp) protein (127aa)
panD; aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
Aspartate 1-decarboxylase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLJ7_STEMA
scnpilot_cont_500_p_scaffold_895_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21009..21851)
DNA (843bp) protein (281aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
pantoate--beta-alanine ligase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F18746 rbh
pantoate--beta-alanine ligase rbh
scnpilot_cont_500_p_scaffold_895_22
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21848..22663)
DNA (816bp) protein (272aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KVA4_STEMA rbh
scnpilot_cont_500_p_scaffold_895_23
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22695..23183)
DNA (489bp) protein (163aa)
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BUL7_XANC5
folK2; probable 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:KHD59963.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
scnpilot_cont_500_p_scaffold_895_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23189..24604)
DNA (1416bp) protein (472aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1118157 species="Bacteria; Proteobacteria;
poly(A) polymerase (EC:2.7.7.19)
Poly(A) polymerase I n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CWW9_STEMA rbh
scnpilot_cont_500_p_scaffold_895_25
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24904..26103
DNA (1200bp) protein (400aa)
Site-specific recombinase, phage integrase family n=1 Tax=Burkholderia multivorans CF2 RepID=J4R1N1_9BURK rbh
phage integrase family protein rbh
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EJO56669.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Bu
scnpilot_cont_500_p_scaffold_895_26
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26100..26231
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA025 RepID=U8PTK9_PSEAI
hypothetical protein
PF06250 family protein {ECO:0000313|EMBL:EJO56658.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
Displaying 26 items

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