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scnpilot_cont_500_p_scaffold_4292

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_4292_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(95..1363)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas maltophilia RepID=J7V5Z2_STEMA rbh
mechanosensitive ion channel
Uncharacterized protein {ECO:0000313|EMBL:EJP77976.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
scnpilot_cont_500_p_scaffold_4292_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1432..1785)
DNA (354bp) protein (118aa)
folB; dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0E3X3_9XANT
Stenotrophomonas maltophilia strain ZBG7B contig_31, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86364.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
scnpilot_cont_500_p_scaffold_4292_3
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1882..2976)
DNA (1095bp) protein (365aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Xanthomonas fuscans subsp. aurantifolii RepID=D4SWV6_9XANT rbh
O-sialoglycoprotein endopeptidase rbh
scnpilot_cont_500_p_scaffold_4292_4
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3107..3322
DNA (216bp) protein (72aa)
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 id=2574242 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pse
scnpilot_cont_500_p_scaffold_4292_5
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3459..3905
DNA (447bp) protein (149aa)
Uncharacterized protein n=10 Tax=Xanthomonas RepID=Q8PFV0_XANAC
Glutamyl-tRNA amidotransferase {ECO:0000313|EMBL:KHD61226.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
hypothetical protein
scnpilot_cont_500_p_scaffold_4292_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3928..4881
DNA (954bp) protein (318aa)
Ribonuclease BN n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0E4N3_9XANT rbh
BrkB protein {ECO:0000313|EMBL:AKC86534.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwon
putative ribonuclease BN
scnpilot_cont_500_p_scaffold_4292_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4939..6672
DNA (1734bp) protein (578aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=522373 species="Bacteria; Proteobacter
DNA primase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E11B95 rbh
dnaG; DNA primase
scnpilot_cont_500_p_scaffold_4292_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6693..7190
DNA (498bp) protein (166aa)
hypothetical protein, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035D4F8B
Uncharacterized protein {ECO:0000313|EMBL:AHY60572.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
beta-lactamase hydrolase-family protein
scnpilot_cont_500_p_scaffold_4292_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7225..8211
DNA (987bp) protein (329aa)
Membrane protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KG57_STEMA rbh
Sodium/bile acid symporter family
Membrane protein {ECO:0000313|EMBL:EQM82593.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia
scnpilot_cont_500_p_scaffold_4292_10
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8276..8686)
DNA (411bp) protein (137aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
cytochrome C oxidase assembly factor protein (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0T2P8_XANCT
scnpilot_cont_500_p_scaffold_4292_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9064..10227)
DNA (1164bp) protein (388aa)
cytochrome oxidase assembly protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FB358F rbh
Cytochrome oxidase assembly protein {ECO:0000313|EMBL:AHY60578.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="S
cytochrome oxidase assembly
scnpilot_cont_500_p_scaffold_4292_12
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10239..10814)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035F521C
Uncharacterized protein {ECO:0000313|EMBL:AHY60579.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
hypothetical protein
scnpilot_cont_500_p_scaffold_4292_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10842..11555)
DNA (714bp) protein (238aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EAA148
Membrane protein {ECO:0000313|EMBL:AHY60580.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
hypothetical protein
scnpilot_cont_500_p_scaffold_4292_14
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11613..11831
DNA (219bp) protein (73aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031C4C7B
Membrane protein {ECO:0000313|EMBL:AHY60581.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
transmembrane protein
scnpilot_cont_500_p_scaffold_4292_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11913..12788)
DNA (876bp) protein (292aa)
MFS transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000379DFD3 rbh
MFS transporter {ECO:0000313|EMBL:AHY60582.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhiz
cytochrome C oxidase subunit III
scnpilot_cont_500_p_scaffold_4292_16
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12810..13397)
DNA (588bp) protein (196aa)
cysteine ABC transporter substrate-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003672D2B rbh
Cytochrome C oxidase assembly protein {ECO:0000313|EMBL:EZP46492.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source
cytochrome C oxidase assembly protein
scnpilot_cont_500_p_scaffold_4292_17
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13394..13528)
DNA (135bp) protein (45aa)
Putative peptide {ECO:0000313|EMBL:EKU24311.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens
scnpilot_cont_500_p_scaffold_4292_18
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13540..15150)
DNA (1611bp) protein (537aa)
cytochrome oxidase subunit I n=1 Tax=Xanthomonas oryzae RepID=UPI0003170110 rbh
Cytochrome oxidase subunit I {ECO:0000313|EMBL:KHS05962.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas a
probable cytochrome c oxidase, subunit I
scnpilot_cont_500_p_scaffold_4292_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15215..16147)
DNA (933bp) protein (311aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia gro
Cytochrome c oxidase subunit 2 n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KRE5_STEMA rbh
cytochrome c oxidase subunit II
scnpilot_cont_500_p_scaffold_4292_20
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16165..16458)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4STH1_STRM5
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:EZP46496.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Steno
Displaying 20 items

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