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scnpilot_cont_500_p_scaffold_1005

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1005_1
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7..909)
DNA (903bp) protein (301aa)
Proline dehydrogenase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WPY1_ACTMD rbh
proline dehydrogenase
Proline dehydrogenase {ECO:0000313|EMBL:ACU35037.1}; Flags: Precursor;; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mi
scnpilot_cont_500_p_scaffold_1005_2
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1002..2561
DNA (1560bp) protein (520aa)
transcriptional regulator n=1 Tax=Actinopolyspora mortivallis RepID=UPI00036AEA2A rbh
Transcriptional regulator {ECO:0000313|EMBL:KJK59083.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
transcriptional regulator CdaR rbh
scnpilot_cont_500_p_scaffold_1005_3
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2756..4375
DNA (1620bp) protein (540aa)
putative delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.2.1.88)
Putative delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AHH96582.1}; EC=1.2.1.88 {ECO:0000313|EMBL:AHH96582.1};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Ps
hypothetical protein n=1 Tax=Saccharomonospora halophila RepID=UPI000375D211 rbh
scnpilot_cont_500_p_scaffold_1005_4
unknown

Not on your lists

comp(4723..4974)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1005_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5316..7937
DNA (2622bp) protein (874aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRG0_PSEUX rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA26168.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_1005_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7943..8383
DNA (441bp) protein (147aa)
Transcriptional regulator, MarR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPY4_PSEUX
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEA26167.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_1005_7
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8418..9068
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Rhodococcus RepID=UPI0003829081 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV01632.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
Transketolase, N-terminal section
scnpilot_cont_500_p_scaffold_1005_8
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9068..9949
DNA (882bp) protein (294aa)
transketolase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFECD0 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV01633.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
Transketolase, C-terminal section rbh
scnpilot_cont_500_p_scaffold_1005_9
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10004..11383)
DNA (1380bp) protein (460aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SHD7_GEOOG rbh
GntR family transcriptional regulator
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ADB77091.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatoph
scnpilot_cont_500_p_scaffold_1005_10
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11410..12096
DNA (687bp) protein (229aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N2_PSEUX
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Flavin-nucleotide-binding protein {ECO:0000313|EMBL:KGH48402.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KN
scnpilot_cont_500_p_scaffold_1005_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12209..14311
DNA (2103bp) protein (701aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase {ECO:0000313|EMBL:AEA26945.1}; EC=3.4.21.26 {ECO:0000313|EMBL:AEA26945.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.
Prolyl oligopeptidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N3_PSEUX rbh
scnpilot_cont_500_p_scaffold_1005_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14313..15296
DNA (984bp) protein (328aa)
small mechanosensitive ion channel protein MscS n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF253 rbh
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEA26946.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
scnpilot_cont_500_p_scaffold_1005_13
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15579..15962
DNA (384bp) protein (128aa)
oxygen-binding heme protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF252
glbN; hemoglobin
Hemoglobin {ECO:0000313|EMBL:AIJ21781.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
scnpilot_cont_500_p_scaffold_1005_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15992..17539
DNA (1548bp) protein (516aa)
Alpha amylase catalytic region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N6_PSEUX rbh
alpha amylase
Alpha amylase catalytic region {ECO:0000313|EMBL:AEA26948.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
scnpilot_cont_500_p_scaffold_1005_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17564..18199)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26949.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1005_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18196..18615)
DNA (420bp) protein (140aa)
Thioesterase superfamily protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N8_PSEUX
thioesterase
Thioesterase superfamily protein {ECO:0000313|EMBL:AEA26950.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
scnpilot_cont_500_p_scaffold_1005_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18619..23355)
DNA (4737bp) protein (1579aa)
NAD-glutamate dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N9_PSEUX rbh
NAD-glutamate dehydrogenase
NAD-glutamate dehydrogenase {ECO:0000313|EMBL:AEA26951.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans
scnpilot_cont_500_p_scaffold_1005_18
unknown

Not on your lists

comp(23479..24363)
DNA (885bp) protein (295aa)

This feature has no annotations

Displaying 18 items

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