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scnpilot_cont_500_p_scaffold_1073

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1073_1
unknown

Not on your lists

2..1855
DNA (1854bp) protein (618aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1073_2
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1904..2344
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SN20_AMYOR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFZ77443.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
scnpilot_cont_500_p_scaffold_1073_3
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2405..3325)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037F4021
Uncharacterized protein {ECO:0000313|EMBL:KJR64080.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum th
transcriptional regulator, LysR family
scnpilot_cont_500_p_scaffold_1073_4
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3421..4959)
DNA (1539bp) protein (513aa)
AMP-dependent synthetase and ligase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J829_FRASU rbh
AMP-dependent synthetase and ligase rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADP82077.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_cont_500_p_scaffold_1073_5
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4923..5978)
DNA (1056bp) protein (352aa)
Amidohydrolase family protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J1RKX0_9NOCA
2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate decarboxylase
2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate decarboxylase {ECO:0000313|EMBL:AJE87287.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" sour
scnpilot_cont_500_p_scaffold_1073_6
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5975..6505)
DNA (531bp) protein (177aa)
Cupin domain containing protein n=1 Tax=Grosmannia clavigera (strain kw1407 / UAMH 11150) RepID=F0XRL3_GROCL
Cupin domain-containing protein {ECO:0000313|EMBL:AKI00720.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMC
hypothetical protein
scnpilot_cont_500_p_scaffold_1073_7
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6525..7472)
DNA (948bp) protein (316aa)
2-hydroxyhepta-2,4-diene- 1,7-dioate isomerase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDC63 rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KJR12161.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides lu
2-keto-4-pentenoate hydratase
scnpilot_cont_500_p_scaffold_1073_8
Pseudomonas sp. CMAA1215, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7469..8845)
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI000310C51A rbh
MFS transporter {ECO:0000313|EMBL:ERO62757.1}; TaxID=1387231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CMAA1215.
MFS transporter
scnpilot_cont_500_p_scaffold_1073_9
Pantoea sp. aB, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8926..10362)
DNA (1437bp) protein (479aa)
Amidohydrolase n=1 Tax=Pantoea sp. aB RepID=E0LTM1_9ENTR
Amidohydrolase {ECO:0000313|EMBL:EFM21961.1}; TaxID=517433 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. aB.;"
mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase
scnpilot_cont_500_p_scaffold_1073_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10473..10673)
DNA (201bp) protein (67aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEA24934.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEA24934.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardi
scnpilot_cont_500_p_scaffold_1073_11
unknown

Not on your lists

comp(10732..11169)
DNA (438bp) protein (146aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1073_12
Corynebacterium halotolerans, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11597..11962
DNA (366bp) protein (122aa)
TnpC n=1 Tax=Corynebacterium halotolerans YIM 70093 = DSM 44683 RepID=M1NW54_9CORY
TnpC
TnpC {ECO:0000313|EMBL:AGF71730.1}; TaxID=1121362 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium halotolerans YIM 70093 = DSM 4468
scnpilot_cont_500_p_scaffold_1073_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12146..13027)
DNA (882bp) protein (294aa)
phosphoribulokinase (EC:2.7.1.19)
Phosphoribulokinase {ECO:0000256|RuleBase:RU004082}; EC=2.7.1.19 {ECO:0000256|RuleBase:RU004082};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia
Phosphoribulokinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP97_PSEUX rbh
scnpilot_cont_500_p_scaffold_1073_14
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13050..14132)
DNA (1083bp) protein (361aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosph
fructose-1,6-bisphosphatase class 1 (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JX57_9MYCO rbh
scnpilot_cont_500_p_scaffold_1073_15
unknown

Not on your lists

comp(14332..14526)
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1073_16
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14859..15446
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J1Z4W2_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EJI95825.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1073_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15544..16425
DNA (882bp) protein (294aa)
Fructose-bisphosphate aldolase class-I n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ67_PSEUX
fructose-bisphosphate aldolase class-I
Fructose-bisphosphate aldolase class-I {ECO:0000313|EMBL:AEA28340.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_1073_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16422..17321
DNA (900bp) protein (300aa)
Fructose-bisphosphate aldolase class-I n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ70_PSEUX
fructose-bisphosphate aldolase class-I
Fructose-bisphosphate aldolase class-I {ECO:0000313|EMBL:AEA28343.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_1073_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17275..18234)
DNA (960bp) protein (320aa)
Phosphoribulokinase/uridine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ71_PSEUX rbh
phosphoribulokinase/uridine kinase
Phosphoribulokinase/uridine kinase {ECO:0000313|EMBL:AEA28344.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
scnpilot_cont_500_p_scaffold_1073_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18289..18945
DNA (657bp) protein (219aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ73_PSEUX rbh
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA28346.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse
scnpilot_cont_500_p_scaffold_1073_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18942..20141
DNA (1200bp) protein (400aa)
GAF sensor signal transduction histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ74_PSEUX rbh
GAF sensor signal transduction histidine kinase
GAF sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEA28347.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
scnpilot_cont_500_p_scaffold_1073_22
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20198..20527)
DNA (330bp) protein (110aa)
transposase IS1549 n=1 Tax=Mycobacterium hassiacum RepID=UPI00037E46CD
Transposase {ECO:0000313|EMBL:KKC06907.1}; TaxID=244292 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
transposase
scnpilot_cont_500_p_scaffold_1073_23
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20747..21028
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW26397.1}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
scnpilot_cont_500_p_scaffold_1073_24
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20992..21237)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000370FA86
Putative transposase {ECO:0000313|EMBL:GAB09159.1}; TaxID=1073574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;"
transposase IS4 family protein
scnpilot_cont_500_p_scaffold_1073_25
unknown

Not on your lists

comp(21624..21782)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1073_26
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21858..22688)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JX73_9MYCO rbh
Uncharacterized protein {ECO:0000313|EMBL:KDE98112.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19
hypothetical protein
scnpilot_cont_500_p_scaffold_1073_27
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22756..23349)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JX74_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:EKF24419.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium hassiacum DSM 44199.
hypothetical protein
Displaying 27 items

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