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scnpilot_cont_500_p_scaffold_1118

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1118_1
unknown

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2..112
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1118_2
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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109..876
DNA (768bp) protein (256aa)
Uncharacterized protein (Fragment) n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1YXA7_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ERI40150.1}; Flags: Fragment;; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1118_3
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

873..2513
DNA (1641bp) protein (547aa)
fucose isomerase n=1 Tax=Serinicoccus marinus RepID=UPI0003B52064 rbh
Fucose isomerase {ECO:0000313|EMBL:KJC63099.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
l-fucose isomerase _2 domain-containing protein
scnpilot_cont_500_p_scaffold_1118_4
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2510..3988
DNA (1479bp) protein (493aa)
Putative xylulose kinase n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82P07_STRAW rbh
xylB2; xylulose kinase rbh
Putative xylulose kinase {ECO:0000313|EMBL:BAC68836.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain AT
scnpilot_cont_500_p_scaffold_1118_5
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(4151..4570)
DNA (420bp) protein (140aa)
Putative short chain dehydrogenase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EUY9_MODMB
short chain dehydrogenase
Putative short chain dehydrogenase {ECO:0000313|EMBL:CCH87202.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marin
scnpilot_cont_500_p_scaffold_1118_6
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4815..5171
DNA (357bp) protein (119aa)
Helix-turn-helix domain protein n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2K2X2_STRHJ
helix-turn-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEY86580.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus
scnpilot_cont_500_p_scaffold_1118_7
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5125..6177)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B709A0 rbh
Uncharacterized protein {ECO:0000313|EMBL:EWS81298.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1118_8
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6251..7342
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RV9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE02673.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickering
scnpilot_cont_500_p_scaffold_1118_9
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7339..8487
DNA (1149bp) protein (383aa)
sodium:hydrogen exchanger n=1 Tax=Rhodococcus opacus RepID=UPI00029CB116
Putative Na(+)/H(+) antiporter yjbQ
Putative Na(+)/H(+) antiporter yjbQ {ECO:0000313|EMBL:AHK30637.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
scnpilot_cont_500_p_scaffold_1118_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8484..9020
DNA (537bp) protein (179aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202, ECO:0000256|SAAS:SAAS00231155}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_
isopentenyl-diphosphate delta-isomerase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF28D
scnpilot_cont_500_p_scaffold_1118_11
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9013..9951
DNA (939bp) protein (313aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:ACU35831.1}; EC=2.7.6.1 {ECO:0000313|EMBL:ACU35831.1};; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Acti
Ribose-phosphate pyrophosphokinase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WE88_ACTMD rbh
scnpilot_cont_500_p_scaffold_1118_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9926..10645)
DNA (720bp) protein (240aa)
HpcH/HpaI aldolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT26_PSEUX
HpcH/HpaI aldolase
HpcH/HpaI aldolase {ECO:0000313|EMBL:AEA25325.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_1118_13
Desulfurispirillum indicum, Desulfurispirillum, Chrysiogenales, Chrysiogenetes, Chrysiogenetes, Bacteria

Not on your lists

10675..11049
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037FD52E
4-oxalocrotonate tautomerase
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:ADU66880.1}; TaxID=653733 species="Bacteria; Chrysiogenetes; Chrysiogenales; Chrysiogenaceae; Desulfurispirillum.;" source="Desulfurispirillum indicum (s
scnpilot_cont_500_p_scaffold_1118_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11021..13606)
DNA (2586bp) protein (862aa)
pyruvate, water dikinase (EC:2.7.9.2)
Pyruvate, water dikinase {ECO:0000313|EMBL:AEA25144.1}; EC=2.7.9.2 {ECO:0000313|EMBL:AEA25144.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI000377E289 rbh
scnpilot_cont_500_p_scaffold_1118_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13724..14257)
DNA (534bp) protein (178aa)
NADPH-dependent FMN reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR84_PSEUX
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:AEA25175.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_1118_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14254..14769)
DNA (516bp) protein (172aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR85_PSEUX
flavin reductase domain-containing FMN-binding protein
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:AEA25176.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseu
scnpilot_cont_500_p_scaffold_1118_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14973..16013)
DNA (1041bp) protein (347aa)
RNA polymerase sigma factor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR87_PSEUX rbh
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_1118_18
Gordonia neofelifaecis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16163..17440)
DNA (1278bp) protein (426aa)
PHB de-polymerase domain protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEDB7 rbh
PHB de-polymerase domain protein {ECO:0000313|EMBL:EGD53496.1}; TaxID=644548 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia neofelifaecis NRRL B-59395
esterase
scnpilot_cont_500_p_scaffold_1118_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17715..19463
DNA (1749bp) protein (583aa)
poly-beta-hydroxybutyrate polymerase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEDB6 rbh
poly-beta-hydroxybutyrate polymerase domain-containing protein
Poly-beta-hydroxybutyrate polymerase domain protein {ECO:0000313|EMBL:AEA25179.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseu
scnpilot_cont_500_p_scaffold_1118_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19481..19894
DNA (414bp) protein (138aa)
Helix-turn-helix domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR89_PSEUX
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEA25180.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo
scnpilot_cont_500_p_scaffold_1118_21
unknown

Not on your lists

19918..20295
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1118_22
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20421..20843)
DNA (423bp) protein (141aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=345341 species="Bacter
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Streptomyces sp. AA4 RepID=D9UXQ9_9ACTO
D-tyrosyl-tRNA(Tyr) deacylase
scnpilot_cont_500_p_scaffold_1118_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20878..22404)
DNA (1527bp) protein (509aa)
Methyltransferase small n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR91_PSEUX rbh
methyltransferase small
Methyltransferase small {ECO:0000313|EMBL:AEA25182.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1118_24
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22416..22781)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Streptomyces sp. TOR3209 RepID=UPI0002E526AE
ECF subfamily RNA polymerase sigma-24 subunit
Sigma factor {ECO:0000313|EMBL:EIF93994.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
Displaying 24 items

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