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scnpilot_cont_500_p_scaffold_1128

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1128_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

513..1787
DNA (1275bp) protein (425aa)
Diguanylate cyclase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMY7_PSEUX
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AEA25086.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_1128_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2276..3616
DNA (1341bp) protein (447aa)
Diguanylate cyclase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMY7_PSEUX rbh
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AEA25086.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_1128_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3732..5045
DNA (1314bp) protein (438aa)
Diguanylate cyclase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMY8_PSEUX rbh
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AEA25087.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_1128_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5120..7018
DNA (1899bp) protein (633aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMY9_PSEUX rbh
scnpilot_cont_500_p_scaffold_1128_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7018..7683
DNA (666bp) protein (222aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMZ0_PSEUX rbh
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA25089.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
scnpilot_cont_500_p_scaffold_1128_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7692..8822
DNA (1131bp) protein (377aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMZ1_PSEUX rbh
histidine kinase
scnpilot_cont_500_p_scaffold_1128_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8782..9789)
DNA (1008bp) protein (336aa)
Transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VYG1_9ACTO rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGZ42023.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 73
scnpilot_cont_500_p_scaffold_1128_8
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9859..11334
DNA (1476bp) protein (492aa)
Putative FAD-dependent monooxygenase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZ16_9ACTO rbh
putative FAD-dependent monooxygenase rbh
Putative FAD-dependent monooxygenase {ECO:0000313|EMBL:AGZ42022.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friulie
scnpilot_cont_500_p_scaffold_1128_9
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11331..12164
DNA (834bp) protein (278aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LQW6_9ACTO rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AGL17640.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N
scnpilot_cont_500_p_scaffold_1128_10
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12161..13006
DNA (846bp) protein (282aa)
Alpha/beta hydrolase fold protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W206_9ACTO rbh
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AGZ42020.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensi
scnpilot_cont_500_p_scaffold_1128_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13239..14390)
DNA (1152bp) protein (384aa)
3'-5' exonuclease n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMZ2_PSEUX rbh
3'-5' exonuclease
3'-5' exonuclease {ECO:0000313|EMBL:AEA25091.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain A
scnpilot_cont_500_p_scaffold_1128_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14492..15145)
DNA (654bp) protein (218aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMZ3_PSEUX rbh
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA25092.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse
scnpilot_cont_500_p_scaffold_1128_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15465..16061)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMZ4_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25093.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1128_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16179..17243
DNA (1065bp) protein (355aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMZ5_PSEUX rbh
scnpilot_cont_500_p_scaffold_1128_15
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17240..18748
DNA (1509bp) protein (503aa)
hemG; protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase {ECO:0000313|EMBL:CAM01149.1}; EC=1.3.3.4 {ECO:0000313|EMBL:CAM01149.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopoly
Protoporphyrinogen oxidase n=1 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FAS4_SACEN rbh
scnpilot_cont_500_p_scaffold_1128_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18830..19525
DNA (696bp) protein (232aa)
Chlorite dismutase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMZ7_PSEUX rbh
chlorite dismutase
Chlorite dismutase {ECO:0000313|EMBL:AEA25096.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_1128_17
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19597..20760)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8SDM8_MICSL
LigA protein {ECO:0000313|EMBL:EWM64030.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1128_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20846..21337)
DNA (492bp) protein (164aa)
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:AEA25099.1}; EC=1.8.4.12 {ECO:0000313|EMBL:AEA25099.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
methionine sulfoxide reductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF32A
scnpilot_cont_500_p_scaffold_1128_19
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21328..21573)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WBE7_ACTMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU35515.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC
scnpilot_cont_500_p_scaffold_1128_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21648..22673
DNA (1026bp) protein (342aa)
DNA polymerase LigD, polymerase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPI4_PSEUX rbh
DNA polymerase LigD, polymerase domain-containing protein
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:AEA25101.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc
scnpilot_cont_500_p_scaffold_1128_21
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22670..23509
DNA (840bp) protein (280aa)
integrase n=1 Tax=Ruania albidiflava RepID=UPI0003B5D652 rbh
Integrase {ECO:0000313|EMBL:EYR62071.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1128_22
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23506..23994)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Brevibacterium casei S18 RepID=K9AR24_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EKU48471.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
scnpilot_cont_500_p_scaffold_1128_23
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24141..24413
DNA (273bp) protein (91aa)
UPI0003D6C43B related cluster n=1 Tax=unknown RepID=UPI0003D6C43B
Uncharacterized protein {ECO:0000313|EMBL:EYR62998.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
Displaying 23 items

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