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scnpilot_cont_500_p_scaffold_1131

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1131_1
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..459)
DNA (459bp) protein (153aa)
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JX80_9MYCO
Acylphosphatase family protein {ECO:0000313|EMBL:EUA52044.1}; TaxID=1299333 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi 3993.;
hydrogenase maturation protein HypF
scnpilot_cont_500_p_scaffold_1131_2
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(471..1646)
DNA (1176bp) protein (392aa)
NHL repeat containing protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JX81_9MYCO rbh
NHL repeat-containing protein {ECO:0000313|EMBL:KGI67835.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
NHL repeat-containing protein rbh
scnpilot_cont_500_p_scaffold_1131_3
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1726..2583)
DNA (858bp) protein (286aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JX82_9MYCO rbh
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:CDO21123.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mage
nitrogen-fixing NifU domain-containing protein
scnpilot_cont_500_p_scaffold_1131_4
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2583..3779)
DNA (1197bp) protein (399aa)
TPR repeat-containing protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JX83_9MYCO rbh
Uncharacterized protein {ECO:0000313|EMBL:KDE98115.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19
tetratricopeptide repeat domain protein
scnpilot_cont_500_p_scaffold_1131_5
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3772..3972)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JX84_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:KDE98116.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19
hypothetical protein
scnpilot_cont_500_p_scaffold_1131_6
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3978..4796)
DNA (819bp) protein (273aa)
Hydrogenase maturation protease n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JX85_9MYCO rbh
Hydrogenase maturation protease {ECO:0000313|EMBL:CQD23001.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;
hydrogenase maturation protease
scnpilot_cont_500_p_scaffold_1131_7
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4793..6400)
DNA (1608bp) protein (536aa)
cytochrome-c3 hydrogenase (EC:1.12.2.1)
Nickel-dependent hydrogenase large subunit n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JX86_9MYCO rbh
Hydrogen:quinone oxidoreductase {ECO:0000313|EMBL:CDO05862.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
scnpilot_cont_500_p_scaffold_1131_8
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6442..7413)
DNA (972bp) protein (324aa)
cytochrome-c3 hydrogenase (EC:1.12.2.1)
NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JX87_9MYCO rbh
Hydrogenase {ECO:0000313|EMBL:KDE98119.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 163
scnpilot_cont_500_p_scaffold_1131_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7522..8055)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS12_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28456.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1131_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8523..9581
DNA (1059bp) protein (353aa)
Transcriptional regulator, AraC family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS11_PSEUX rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEA28455.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_1131_11
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10245..10991)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000372800D rbh
Hydrogenase nickel incorporation protein HypB {ECO:0000313|EMBL:CQD22988.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium
hydrogenase nickel incorporation protein HypB rbh
scnpilot_cont_500_p_scaffold_1131_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10995..11333)
DNA (339bp) protein (113aa)
Hydrogenase expression/synthesis HypA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS10_PSEUX
hydrogenase nickel incorporation protein HypA
Hydrogenase expression/synthesis HypA {ECO:0000313|EMBL:AEA28454.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
scnpilot_cont_500_p_scaffold_1131_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11621..13666)
DNA (2046bp) protein (682aa)
transketolase (EC:2.2.1.1)
Transketolase {ECO:0000313|EMBL:AEA28345.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AEA28345.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source=
Transketolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ72_PSEUX rbh
scnpilot_cont_500_p_scaffold_1131_14
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13663..14349)
DNA (687bp) protein (229aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycoba
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X7J0_9PSEU
scnpilot_cont_500_p_scaffold_1131_15
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14538..15542)
DNA (1005bp) protein (335aa)
Fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JX94_9MYCO rbh
Fructose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:CQD22970.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavu
scnpilot_cont_500_p_scaffold_1131_16
Mycobacterium sp. DSM 3803, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15708..17138
DNA (1431bp) protein (477aa)
ribulose bisphosphate carboxylase large chain (EC:4.1.1.39)
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit-1 n=1 Tax=Mycobacterium sp. DSM 3803 RepID=A8C9T6_9MYCO rbh
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit-1 {ECO:0000313|EMBL:ABV69587.1}; TaxID=212194 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" sou
scnpilot_cont_500_p_scaffold_1131_17
Mycobacterium sp. DSM 3803, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17155..17580
DNA (426bp) protein (142aa)
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit-2 n=1 Tax=Mycobacterium sp. DSM 3803 RepID=A8C9T9_9MYCO
Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit-2 {ECO:0000313|EMBL:ABV69590.1}; TaxID=212194 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" sou
scnpilot_cont_500_p_scaffold_1131_18
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17584..18645
DNA (1062bp) protein (354aa)
CbbX protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ79_PSEUX rbh
ESX-1 secretion system protein EccA1 {ECO:0000313|EMBL:CQD22933.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentifla
CbbX protein
scnpilot_cont_500_p_scaffold_1131_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18642..19538
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ80_PSEUX rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEA28353.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_1131_20
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20053..20799
DNA (747bp) protein (249aa)
SufR family transcriptional regulator n=1 Tax=Rhodococcus opacus M213 RepID=K8XPC0_RHOOP rbh
Regulatory protein ArsR {ECO:0000313|EMBL:EWM19195.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SufR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1131_21
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20945..21448)
DNA (504bp) protein (168aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNU2_NOCSJ
hemerythrin HHE cation binding domain-containing protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:ABL83477.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides
scnpilot_cont_500_p_scaffold_1131_22
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21544..21897
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000369B651
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK52271.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC
scnpilot_cont_500_p_scaffold_1131_23
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21863..22615
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000369AFF1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM16490.1}; Flags: Fragment;; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans
hypothetical protein
Displaying 23 items

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