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scnpilot_cont_500_p_scaffold_1165

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1165_1
unknown

Not on your lists

1..144
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1165_2
unknown

Not on your lists

comp(87..305)
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1165_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(507..878)
DNA (372bp) protein (124aa)
Transcriptional regulator WhiB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW74_PSEUX
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
scnpilot_cont_500_p_scaffold_1165_4
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1437..1748
DNA (312bp) protein (104aa)
Transcriptional regulator WhiB n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JPA6_STREN
WhiB-family transcriptional regulator
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
scnpilot_cont_500_p_scaffold_1165_5
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1745..2398
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Amycolatopsis mediterranei (strain S699) RepID=G0G215_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK44171.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strai
scnpilot_cont_500_p_scaffold_1165_6
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2395..4080
DNA (1686bp) protein (562aa)
Putative alcohol dehydrogenase n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82NZ9_STRAW
adhA1; alcohol dehydrogenase
Putative alcohol dehydrogenase {ECO:0000313|EMBL:BAC68851.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (str
scnpilot_cont_500_p_scaffold_1165_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4077..6734
DNA (2658bp) protein (886aa)
Mg(2+) transport ATPase, P-type n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B5B1_STRRD rbh
Mg(2+) transport ATPase, P-type
Mg(2+) transport ATPase, P-type {ECO:0000313|EMBL:ACZ87635.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium
scnpilot_cont_500_p_scaffold_1165_8
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6754..8205)
DNA (1452bp) protein (484aa)
Gluconate permease n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E5U3_9MICO rbh
Gluconate permease {ECO:0000313|EMBL:CCH71505.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
gntP; gluconate permease rbh
scnpilot_cont_500_p_scaffold_1165_9
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8202..8732)
DNA (531bp) protein (177aa)
thermoresistant glucokinase family carbohydrate kinase (EC:2.7.1.12)
Carbohydrate kinase, thermoresistant glucokinase family {ECO:0000313|EMBL:ADP83563.1}; EC=2.7.1.12 {ECO:0000313|EMBL:ADP83563.1};; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiace
Carbohydrate kinase, thermoresistant glucokinase family n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JDD0_FRASU
scnpilot_cont_500_p_scaffold_1165_10
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8973..9665
DNA (693bp) protein (231aa)
ornithine aminotransferase n=1 Tax=Glaciibacter superstes RepID=UPI0003B661C6
Uncharacterized protein {ECO:0000313|EMBL:EWM12133.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
putative osmotically inducible protein Y
scnpilot_cont_500_p_scaffold_1165_11
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9978..10115
DNA (138bp) protein (46aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003741056
NAD(P) transhydrogenase subunit beta
scnpilot_cont_500_p_scaffold_1165_12
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10157..10576
DNA (420bp) protein (140aa)
Universal stress protein n=1 Tax=Streptomyces zinciresistens K42 RepID=G2GPT4_9ACTO
Universal stress protein {ECO:0000313|EMBL:EGX54482.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
stress-inducible protein
scnpilot_cont_500_p_scaffold_1165_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10975..12258)
DNA (1284bp) protein (428aa)
Transcriptional regulator, CdaR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1T7_PSEUX rbh
transcriptional regulator CdaR
Transcriptional regulator, CdaR {ECO:0000313|EMBL:AEA27997.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo
scnpilot_cont_500_p_scaffold_1165_14
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12407..13354)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI000380D90E
Universal stress protein UspA {ECO:0000313|EMBL:AKH82118.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1165_15
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13351..14316)
DNA (966bp) protein (322aa)
Stomatin family protein n=2 Tax=Rhodococcus opacus RepID=C1AS68_RHOOB rbh
stomatin family protein
Stomatin family protein {ECO:0000313|EMBL:BAH48317.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
scnpilot_cont_500_p_scaffold_1165_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14402..14680)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1T4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27994.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1165_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14794..15258
DNA (465bp) protein (155aa)
Transcriptional regulator, MarR family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFH0_NAKMY
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACV79947.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (
scnpilot_cont_500_p_scaffold_1165_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15144..15956)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1T6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27996.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1165_19
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16132..16590)
DNA (459bp) protein (153aa)
Transcription elongation factor GreA n=1 Tax=Saccharomonospora glauca K62 RepID=I1D635_9PSEU
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=928724 species="Bacteria
transcription elongation factor GreA
scnpilot_cont_500_p_scaffold_1165_20
unknown

Not on your lists

comp(16646..16903)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1165_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17984..19258)
DNA (1275bp) protein (425aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH-quinone oxidoreductase, F subunit {ECO:0000313|EMBL:AEA27693.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AEA27693.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
NADH-quinone oxidoreductase, F subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYW8_PSEUX
scnpilot_cont_500_p_scaffold_1165_22
unknown

Not on your lists

comp(19338..19508)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1165_23
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19505..19861)
DNA (357bp) protein (119aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SBL7_GEOOG
LuxR family transcriptional regulator {ECO:0000313|EMBL:EWT02914.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryz
Cupin 2 barrel domain-containing protein
scnpilot_cont_500_p_scaffold_1165_24
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20195..20518)
DNA (324bp) protein (108aa)
RNA polymerase-binding protein RbpA n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q9H6_STANL
hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassaue
scnpilot_cont_500_p_scaffold_1165_25
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20639..21478)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003664464
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH98816.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
scnpilot_cont_500_p_scaffold_1165_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21716..22414
DNA (699bp) protein (233aa)
Regulatory protein MarR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVW3_PSEUX
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEA25448.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1165_27
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22380..23048)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI000376B00E
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AIJ26161.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methano
scnpilot_cont_500_p_scaffold_1165_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23041..23403)
DNA (363bp) protein (121aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUK5_PSEUX
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:AEA25395.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
scnpilot_cont_500_p_scaffold_1165_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23527..24270
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUK4_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25394.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1165_30
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24278..24667
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3B582_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD89342.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
hypothetical protein
Displaying items 1-30 of 39 in total

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