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scnpilot_cont_500_p_scaffold_1450

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1450_1
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..694
DNA (693bp) protein (231aa)
acetate permease n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003642214
Acetate permease {ECO:0000313|EMBL:KDN20001.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
solute:Na+ symporter
scnpilot_cont_500_p_scaffold_1450_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1063..3444
DNA (2382bp) protein (794aa)
Isoquinoline 1-oxidoreductase (EC:1.3.99.16)
Isoquinoline 1-oxidoreductase {ECO:0000313|EMBL:AEA22543.1}; EC=1.3.99.16 {ECO:0000313|EMBL:AEA22543.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudon
isoquinoline 1-oxidoreductase subunit beta n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000371E635 rbh
scnpilot_cont_500_p_scaffold_1450_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3456..3935
DNA (480bp) protein (160aa)
Isoquinoline 1-oxidoreductase (EC:1.3.99.16)
Isoquinoline 1-oxidoreductase {ECO:0000313|EMBL:AEA22544.1}; EC=1.3.99.16 {ECO:0000313|EMBL:AEA22544.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudon
isoquinoline 1-oxidoreductase subunit alpha n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003616DEA
scnpilot_cont_500_p_scaffold_1450_4
unknown

Not on your lists

4020..4337
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF153
scnpilot_cont_500_p_scaffold_1450_5
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4550..5422
DNA (873bp) protein (291aa)
Transcriptional regulator, LuxR family n=2 Tax=Frankia sp. (strain CcI3) RepID=Q2J5R7_FRASC
LuxR family transcriptional regulator {ECO:0000313|EMBL:GAM51182.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
LuxR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1450_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5759..6799)
DNA (1041bp) protein (347aa)
tjhreonine aldolase (EC:4.1.2.5)
Threonine aldolase {ECO:0000313|EMBL:AEA22694.1}; EC=4.1.2.5 {ECO:0000313|EMBL:AEA22694.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" so
Threonine aldolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKF4_PSEUX rbh
scnpilot_cont_500_p_scaffold_1450_7
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7054..7572
DNA (519bp) protein (173aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KD39_SACES
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CEL15756.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp.
RNA polymerase, sigma-24 subunit, ECF subfamily
scnpilot_cont_500_p_scaffold_1450_8
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7569..8231
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI0003695E22
Uncharacterized protein {ECO:0000313|EMBL:CAM06318.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (
hypothetical protein
scnpilot_cont_500_p_scaffold_1450_9
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8312..8854
DNA (543bp) protein (181aa)
TetR family transcriptional regulator n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B14A
TetR family transcriptional regulator {ECO:0000313|EMBL:KEI44623.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspor
TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1450_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8924..10351
DNA (1428bp) protein (476aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKF7_PSEUX rbh
scnpilot_cont_500_p_scaffold_1450_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10348..11193
DNA (846bp) protein (282aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=67
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKF8_PSEUX rbh
scnpilot_cont_500_p_scaffold_1450_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11207..11956
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKF9_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22699.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1450_13
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11919..12125)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002F750A7
LacI family transcriptional regulator {ECO:0000313|EMBL:KGM09311.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26
scnpilot_cont_500_p_scaffold_1450_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12198..12824)
DNA (627bp) protein (209aa)
Beta-lactamase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKG0_PSEUX rbh
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AEA22700.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_1450_15
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12925..13683
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003672D19
Hydrolase {ECO:0000313|EMBL:EWM11673.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
alpha/beta hydrolase fold protein
scnpilot_cont_500_p_scaffold_1450_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13700..13936
DNA (237bp) protein (79aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
Phosphoribosylformylglycinamidine synthase, purS n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKG1_PSEUX
phosphoribosylformylglycinamidine synthase PurS
scnpilot_cont_500_p_scaffold_1450_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13933..14604
DNA (672bp) protein (224aa)
phosphoribosylformylglycinamidine synthase 1 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:000025
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKG2_PSEUX rbh
scnpilot_cont_500_p_scaffold_1450_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14601..15668
DNA (1068bp) protein (356aa)
Response regulator receiver modulated serine phosphatase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKG3_PSEUX rbh
response regulator receiver modulated serine phosphatase
Response regulator receiver modulated serine phosphatase {ECO:0000313|EMBL:AEA22703.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source=
scnpilot_cont_500_p_scaffold_1450_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15665..17236
DNA (1572bp) protein (524aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKG4_PSEUX rbh
histidine kinase
scnpilot_cont_500_p_scaffold_1450_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17236..17679
DNA (444bp) protein (148aa)
Response regulator receiver protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKG5_PSEUX
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEA22705.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_1450_21
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17765..19435
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNQ766 RepID=UPI00037603EF rbh
Uncharacterized protein {ECO:0000313|EMBL:KES06036.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
PA14 domain-containing protein
scnpilot_cont_500_p_scaffold_1450_22
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19423..20445)
DNA (1023bp) protein (341aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EKX66015.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EKX66015.1};; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" s
galE1; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KZV7_9ACTO rbh
scnpilot_cont_500_p_scaffold_1450_23
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20442..22202)
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QVV5_9ACTO rbh
N-acetylglucosaminyltransferase {ECO:0000313|EMBL:KES06039.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1450_24
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22297..23277)
DNA (981bp) protein (327aa)
UDP-glucuronic acid decarboxylase 1 (EC:4.1.1.35)
UDP-glucuronic acid decarboxylase 1 {ECO:0000313|EMBL:CCK25071.1}; EC=4.1.1.35 {ECO:0000313|EMBL:CCK25071.1};; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Str
UDP-glucuronic acid decarboxylase 1 n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QSQ7_9ACTO rbh
scnpilot_cont_500_p_scaffold_1450_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23454..25733
DNA (2280bp) protein (760aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKG6_PSEUX rbh
scnpilot_cont_500_p_scaffold_1450_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25733..26143
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE000
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22707.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1450_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26275..28419
DNA (2145bp) protein (715aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKG8_PSEUX rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AEA22708.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
scnpilot_cont_500_p_scaffold_1450_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28447..30033
DNA (1587bp) protein (529aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
amidophosphoribosyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE001 rbh
scnpilot_cont_500_p_scaffold_1450_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30069..31166
DNA (1098bp) protein (366aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKH0_PSEUX rbh
scnpilot_cont_500_p_scaffold_1450_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31332..32003)
DNA (672bp) protein (224aa)
NUDIX hydrolase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE003 rbh
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEA22711.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATC
Displaying items 1-30 of 55 in total

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