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scnpilot_cont_500_p_scaffold_1617

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1617_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(701..1648)
DNA (948bp) protein (316aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXW5_PSEUX rbh
scnpilot_cont_500_p_scaffold_1617_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1673..3004)
DNA (1332bp) protein (444aa)
GntR family transcriptional regulator (EC:2.6.1.7)
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:AEA28770.1}; EC=2.6.1.7 {ECO:0000313|EMBL:AEA28770.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocar
Putative transcriptional regulator, GntR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXW4_PSEUX rbh
scnpilot_cont_500_p_scaffold_1617_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3229..3906
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXW3_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28769.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1617_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3940..5097)
DNA (1158bp) protein (386aa)
Cell wall hydrolase/autolysin n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXW2_PSEUX rbh
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:AEA28768.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_1617_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5312..5641)
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXW1_PSEUX
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
scnpilot_cont_500_p_scaffold_1617_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5677..6678)
DNA (1002bp) protein (334aa)
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardi
Thioredoxin reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXW0_PSEUX rbh
scnpilot_cont_500_p_scaffold_1617_7
unknown

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comp(6778..7734)
DNA (957bp) protein (319aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1617_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7731..8276)
DNA (546bp) protein (182aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXV8_PSEUX
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA28764.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
scnpilot_cont_500_p_scaffold_1617_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8337..10040)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXV7_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28763.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1617_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10101..11780)
DNA (1680bp) protein (560aa)
Integral membrane protein MviN n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUW3_PSEUX rbh
integral membrane protein MviN
Integral membrane protein MviN {ECO:0000313|EMBL:AEA27432.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
scnpilot_cont_500_p_scaffold_1617_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11777..14338)
DNA (2562bp) protein (854aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXV6_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28762.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_1617_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14335..14829)
DNA (495bp) protein (165aa)
NUDIX hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXV5_PSEUX rbh
NUDIX hydrolase rbh
NUDIX hydrolase {ECO:0000313|EMBL:AEA28761.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
scnpilot_cont_500_p_scaffold_1617_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14997..16388
DNA (1392bp) protein (464aa)
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXV4_PSEUX rbh
polynucleotide adenylyltransferase
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase {ECO:0000313|EMBL:AEA28760.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia
scnpilot_cont_500_p_scaffold_1617_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16447..17694)
DNA (1248bp) protein (416aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXV3_PSEUX rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA28759.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
Displaying 14 items

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