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scnpilot_cont_500_p_scaffold_1676

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1676_1
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..214)
DNA (213bp) protein (71aa)
amino acid transporter n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B56110
Amino acid permease {ECO:0000313|EMBL:EWT00753.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
amino acid transporter
scnpilot_cont_500_p_scaffold_1676_2
Streptomyces griseorubens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(466..1317)
DNA (852bp) protein (284aa)
Beta-lactamase {ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|SAAS:SAAS00063099};; TaxID=66897 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source=
penP; beta-lactamase (EC:3.5.2.6)
hypothetical protein n=1 Tax=Streptomyces viridosporus RepID=UPI00030FC930 rbh
scnpilot_cont_500_p_scaffold_1676_3
Tupaia chinensis, Tupaia, Scandentia, Mammalia, Chordata, Metazoa

Not on your lists

comp(1373..2398)
DNA (1026bp) protein (342aa)
Proteoglycan 4 n=1 Tax=Tupaia chinensis RepID=L8Y516_TUPCH
Proteoglycan 4 {ECO:0000313|EMBL:ELV11508.1}; TaxID=246437 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupai
hypothetical protein
scnpilot_cont_500_p_scaffold_1676_4
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2412..3353)
DNA (942bp) protein (314aa)
glycosyl hydrolase (EC:3.2.1.-)
Glycosyl hydrolase, family 16 n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M710_GRAFK
Uncharacterized protein {ECO:0000313|EMBL:KGO81586.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bei
scnpilot_cont_500_p_scaffold_1676_5
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3843..4403
DNA (561bp) protein (187aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9J7_GEOOG
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADB75797.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geod
scnpilot_cont_500_p_scaffold_1676_6
Gordonia sp. no. 9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4685..5176
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003766EC5
Guanylyl cyclase {ECO:0000313|EMBL:KJR09282.1}; TaxID=1617449 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. no. 9.;"
Adenylate cyclase
scnpilot_cont_500_p_scaffold_1676_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5313..6059)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003812943 rbh
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein {ECO:0000313|EMBL:ACV78403.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae;
scnpilot_cont_500_p_scaffold_1676_8
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6056..8008)
DNA (1953bp) protein (651aa)
acetoacetyl-CoA synthetase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE097 rbh
Putative acetoacetyl-CoA synthetase {ECO:0000313|EMBL:GAB93080.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068
acetoacetyl-CoA synthase rbh
scnpilot_cont_500_p_scaffold_1676_9
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8129..9115
DNA (987bp) protein (329aa)
luciferase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000361A38F rbh
Uncharacterized protein {ECO:0000313|EMBL:EMD26527.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;
luciferase-like monooxygenase
scnpilot_cont_500_p_scaffold_1676_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9197..9886
DNA (690bp) protein (230aa)
histidine kinase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF1DA rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EXG82821.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cr
putative OmpR family two-component response regulator
scnpilot_cont_500_p_scaffold_1676_11
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9886..11532
DNA (1647bp) protein (549aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;"
multi-sensor signal transduction histidine kinase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF1DB rbh
multi-sensor signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_1676_12
Brachybacterium muris, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11540..11866)
DNA (327bp) protein (109aa)
plasmid stabilization protein n=1 Tax=Brachybacterium muris RepID=UPI0003486CA5
Plasmid stabilization protein {ECO:0000313|EMBL:EYT51209.1}; TaxID=1249481 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium muris UCD-AY4.
plasmid stabilization protein
scnpilot_cont_500_p_scaffold_1676_13
unknown

Not on your lists

comp(11934..12317)
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1676_14
unknown

Not on your lists

12405..12842
DNA (438bp) protein (146aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1676_15
unknown

Not on your lists

comp(12931..13167)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1676_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13192..14091
DNA (900bp) protein (300aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVE7_PSEUX rbh
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:AEA23446.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" so
scnpilot_cont_500_p_scaffold_1676_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14078..14833)
DNA (756bp) protein (252aa)
Protein-disulfide isomerase-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVE6_PSEUX
protein-disulfide isomerase-like protein
Protein-disulfide isomerase-like protein {ECO:0000313|EMBL:AEA23445.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
scnpilot_cont_500_p_scaffold_1676_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14835..15305)
DNA (471bp) protein (157aa)
DoxX family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVE5_PSEUX
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AEA23444.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_1676_19
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15327..16808)
DNA (1482bp) protein (494aa)
deoxyribodipyrimidine photolyase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF3CE rbh
deoxyribodipyrimidine photolyase-like protein
Deoxyribodipyrimidine photolyase-related protein {ECO:0000313|EMBL:ABP45964.1}; TaxID=350054 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacter
scnpilot_cont_500_p_scaffold_1676_20
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17271..17582
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Micromonospora RepID=E8S9T2_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL45015.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
scnpilot_cont_500_p_scaffold_1676_21
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18186..19418)
DNA (1233bp) protein (411aa)
trans-acting enoyl reductase (EC:1.3.1.-)
Trans-acting enoyl reductase {ECO:0000313|EMBL:CCG03745.1}; EC=1.3.1.- {ECO:0000313|EMBL:CCG03745.1};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastoc
Trans-acting enoyl reductase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RLL9_BLASD rbh
scnpilot_cont_500_p_scaffold_1676_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19913..20857)
DNA (945bp) protein (315aa)
Amidohydrolase 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVD6_PSEUX rbh
amidohydrolase
Amidohydrolase 2 {ECO:0000313|EMBL:AEA23435.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain AT
scnpilot_cont_500_p_scaffold_1676_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20854..21342)
DNA (489bp) protein (163aa)
SsrA-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVD5_PSEUX
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="
scnpilot_cont_500_p_scaffold_1676_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21363..22265)
DNA (903bp) protein (301aa)
Cell division protein FtsX n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVD4_PSEUX rbh
hypothetical protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
scnpilot_cont_500_p_scaffold_1676_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22304..22993)
DNA (690bp) protein (230aa)
cell division ATP-binding protein FtsE (EC:3.6.3.31)
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:AEA23432.1}; EC=3.6.3.31 {ECO:0000313|EMBL:AEA23432.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
Cell division ATP-binding protein FtsE n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVD3_PSEUX rbh
scnpilot_cont_500_p_scaffold_1676_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23068..24174)
DNA (1107bp) protein (369aa)
Peptide chain release factor 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVD2_PSEUX rbh
peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudono
scnpilot_cont_500_p_scaffold_1676_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24200..24715)
DNA (516bp) protein (172aa)
PadR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE7F3
PadR family transcriptional regulator
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:AEA23430.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
Displaying 27 items

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