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scnpilot_cont_500_p_scaffold_1785

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1785_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1453)
DNA (1452bp) protein (484aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AEA25932.1}; EC=1.2.1.27 {ECO:0000313|EMBL:AEA25932.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiace
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJS2_PSEUX rbh
scnpilot_cont_500_p_scaffold_1785_2
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1450..3303)
DNA (1854bp) protein (618aa)
Putative myo-inositol catabolism protein IolD n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W055_9ACTO rbh
putative myo-inositol catabolism protein IolD
Putative myo-inositol catabolism protein IolD {ECO:0000313|EMBL:AGZ42412.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplane
scnpilot_cont_500_p_scaffold_1785_3
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3300..4178)
DNA (879bp) protein (293aa)
5-deoxyglucuronate isomerase n=1 Tax=Actinoplanes globisporus RepID=UPI0003706947 rbh
iolB; Myo-inositol catabolism IolB domain-containing protein rbh
Myo-inositol catabolism IolB domain-containing protein {ECO:0000313|EMBL:AGL18273.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Act
scnpilot_cont_500_p_scaffold_1785_4
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4252..5127)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W338_9ACTO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ42410.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
scnpilot_cont_500_p_scaffold_1785_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5120..6076)
DNA (957bp) protein (319aa)
IolC protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZU5_9ACTO rbh
IolC protein rbh
IolC protein {ECO:0000313|EMBL:AGZ42409.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_cont_500_p_scaffold_1785_6
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6146..6889
DNA (744bp) protein (248aa)
GntR family transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZI2_9ACTO rbh
GntR family transcriptional regulator rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:AGZ42408.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuli
scnpilot_cont_500_p_scaffold_1785_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6910..7125)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKH4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22714.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1785_8
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7270..8469)
DNA (1200bp) protein (400aa)
Permease, MFS-type n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K576_SACES rbh
Permease, MFS-type
Permease, MFS-type {ECO:0000313|EMBL:CCH35430.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATC
scnpilot_cont_500_p_scaffold_1785_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8526..9614)
DNA (1089bp) protein (363aa)
Folate-binding protein YgfZ n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKH6_PSEUX rbh
folate-binding protein YgfZ
Folate-binding protein YgfZ {ECO:0000313|EMBL:AEA22716.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans
scnpilot_cont_500_p_scaffold_1785_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9615..9998)
DNA (384bp) protein (128aa)
Ferric uptake regulator, Fur family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKH7_PSEUX
Fur family ferric uptake regulator
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:AEA22717.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_1785_11
unknown

Not on your lists

11420..11701
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1785_12
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

11747..12766
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XRE3_BRAFL
Putative uncharacterized protein {ECO:0000313|EMBL:EEN69261.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Fl
hypothetical protein
scnpilot_cont_500_p_scaffold_1785_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12771..13391)
DNA (621bp) protein (207aa)
UPF0678 fatty acid-binding protein-like protein Psed_0452 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKI0_PSEUX rbh
hypothetical protein
UPF0678 fatty acid-binding protein-like protein Psed_0452 {ECO:0000256|HAMAP-Rule:MF_01297}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" so
scnpilot_cont_500_p_scaffold_1785_14
unknown

Not on your lists

comp(13388..13501)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1785_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13591..13890)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEBF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22722.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1785_16
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13890..14729)
DNA (840bp) protein (280aa)
thiosulfate sulfurtransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEBF4 rbh
hypothetical protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
scnpilot_cont_500_p_scaffold_1785_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14726..15172)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM41_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22724.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1785_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15376..15780)
DNA (405bp) protein (135aa)
Thioredoxin n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM42_PSEUX
thioredoxin
Thioredoxin {ECO:0000313|EMBL:AEA22725.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55
scnpilot_cont_500_p_scaffold_1785_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15837..16622)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM43_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22726.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_1785_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16907..17677
DNA (771bp) protein (257aa)
Transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM44_PSEUX rbh
winged helix family transcriptional regulator
Transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA22727.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc
scnpilot_cont_500_p_scaffold_1785_21
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17693..18622
DNA (930bp) protein (310aa)
Mycothiol acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01698, ECO:0000256|SAAS:SAAS00034899}; Short=MSH acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01698};; EC=2.3.1.189 {ECO:0000256|HAMAP-Rule:MF_01
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036B7512 rbh
N-acetyltransferase GCN5
scnpilot_cont_500_p_scaffold_1785_22
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18849..19961
DNA (1113bp) protein (371aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED75 rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; Flags: Precursor;; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="S
phosphate-binding protein
scnpilot_cont_500_p_scaffold_1785_23
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20076..21038
DNA (963bp) protein (321aa)
Phosphate ABC transporter permease protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6W9J4_9MICO rbh
Phosphate ABC transporter permease protein {ECO:0000313|EMBL:GAB95860.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa
phosphate ABC transporter permease
scnpilot_cont_500_p_scaffold_1785_24
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21038..22135
DNA (1098bp) protein (366aa)
phosphate ABC transporter permease n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED77 rbh
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EID54525.1}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Sacc
phosphate ABC transporter membrane protein
scnpilot_cont_500_p_scaffold_1785_25
Jonesia denitrificans, Jonesia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22144..22923
DNA (780bp) protein (260aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
phosphate ABC transporter ATP-binding protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED78 rbh
phosphate ABC transporter ATPase
scnpilot_cont_500_p_scaffold_1785_26
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22973..23281
DNA (309bp) protein (103aa)
ArsR family transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VV06_9ACTO
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AGZ40694.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuli
scnpilot_cont_500_p_scaffold_1785_27
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23281..23907
DNA (627bp) protein (209aa)
Co/Zn/Cd cation transporters-like protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PM75_9PSEU rbh
Co/Zn/Cd cation transporters-like protein {ECO:0000313|EMBL:EMD25618.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis
Co/Zn/Cd cation transporters-like protein
scnpilot_cont_500_p_scaffold_1785_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23904..24554)
DNA (651bp) protein (217aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM52_PSEUX
phosphate uptake regulator PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
scnpilot_cont_500_p_scaffold_1785_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24559..25215)
DNA (657bp) protein (219aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM52_PSEUX rbh
phosphate uptake regulator PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
scnpilot_cont_500_p_scaffold_1785_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25298..26902)
DNA (1605bp) protein (535aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM53_PSEUX rbh
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:AEA22736.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudon
Displaying items 1-30 of 56 in total

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