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scnpilot_cont_500_p_scaffold_1850

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1850_1
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..952
DNA (951bp) protein (317aa)
oxidoreductase fad-binding domain protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE367
Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 {ECO:0000313|EMBL:EWC59068.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" s
ferredoxin
scnpilot_cont_500_p_scaffold_1850_2
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

965..2068
DNA (1104bp) protein (368aa)
fatty acid desaturase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE368 rbh
fatty acid desaturase
Fatty acid desaturase {ECO:0000313|EMBL:AEH07741.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
scnpilot_cont_500_p_scaffold_1850_3
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2164..2958
DNA (795bp) protein (265aa)
Uncharacterized protein {ECO:0000313|EMBL:KGH45654.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
scnpilot_cont_500_p_scaffold_1850_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3014..4663
DNA (1650bp) protein (550aa)
ABC transporter related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYZ2_PSEUX rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEA27717.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo
scnpilot_cont_500_p_scaffold_1850_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4693..4989)
DNA (297bp) protein (99aa)
HesB/YadR/YfhF-family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYZ3_PSEUX
HesB/YadR/YfhF-family protein
HesB/YadR/YfhF-family protein {ECO:0000313|EMBL:AEA27718.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_1850_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5042..5872)
DNA (831bp) protein (277aa)
2,5-didehydrogluconate reductase (EC:1.1.1.274)
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:AEA27719.1}; EC=1.1.1.274 {ECO:0000313|EMBL:AEA27719.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseu
2,5-didehydrogluconate reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYZ4_PSEUX rbh
scnpilot_cont_500_p_scaffold_1850_7
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5892..7007)
DNA (1116bp) protein (372aa)
Patatin n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SB52_GEOOG rbh
Patatin
Patatin {ECO:0000313|EMBL:ADB74000.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078
scnpilot_cont_500_p_scaffold_1850_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7140..9983)
DNA (2844bp) protein (948aa)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:AEA29032.1}; EC=1.1.2.4 {ECO:0000313|EMBL:AEA29032.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Ps
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L759_PSEUX rbh
D-lactate dehydrogenase (cytochrome)
scnpilot_cont_500_p_scaffold_1850_9
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9988..10449)
DNA (462bp) protein (154aa)
Regulatory protein, FmdB family n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PGI7_STRVO
FmdB family regulatory protein
Regulatory protein, FmdB family {ECO:0000313|EMBL:AEM85566.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger
scnpilot_cont_500_p_scaffold_1850_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10512..11795)
DNA (1284bp) protein (428aa)
Hydroxyacid-oxoacid transhydrogenase {ECO:0000313|EMBL:AEA29033.1}; EC=1.1.99.24 {ECO:0000313|EMBL:AEA29033.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
alcohol dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE2CF rbh
Hydroxyacid-oxoacid transhydrogenase
scnpilot_cont_500_p_scaffold_1850_11
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11792..12604)
DNA (813bp) protein (271aa)
Beta-lactamase domain-containing protein n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PGI5_STRVO rbh
beta-lactamase domain-containing protein
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AEM85564.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violac
scnpilot_cont_500_p_scaffold_1850_12
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12691..13803)
DNA (1113bp) protein (371aa)
transport associated protein n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI000380A4C1 rbh
Kitasatospora griseola strain MF730-N6 RKJC_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ65884.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatos
transport associated protein
scnpilot_cont_500_p_scaffold_1850_13
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13824..14426)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE2CE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ40788.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
scnpilot_cont_500_p_scaffold_1850_14
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14453..14659
DNA (207bp) protein (69aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FZW5_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK40564.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strai
scnpilot_cont_500_p_scaffold_1850_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14669..15577
DNA (909bp) protein (303aa)
naphthoate synthase (EC:4.1.3.36)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=675635 speci
Naphthoate synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZP9_PSEUX rbh
scnpilot_cont_500_p_scaffold_1850_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15604..16839
DNA (1236bp) protein (412aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:AEA27728.1}; EC=6.2.1.26 {ECO:0000313|EMBL:AEA27728.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudon
O-succinylbenzoate--CoA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZQ2_PSEUX rbh
scnpilot_cont_500_p_scaffold_1850_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16961..18280
DNA (1320bp) protein (440aa)
SH3 type 3 domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZQ3_PSEUX rbh
SH3 type 3 domain-containing protein
SH3 type 3 domain protein {ECO:0000313|EMBL:AEA27729.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocar
Displaying 17 items

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