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scnpilot_cont_500_p_scaffold_1947

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1947_1
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..130
DNA (129bp) protein (43aa)
Diaminobutyrate--2-oxoglutarate aminotransferase {ECO:0000313|EMBL:KGI80190.1}; EC=2.6.1.76 {ECO:0000313|EMBL:KGI80190.1};; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopo
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI0003740F6D
scnpilot_cont_500_p_scaffold_1947_2
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(339..1283)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RRW2_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02956.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strai
scnpilot_cont_500_p_scaffold_1947_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1495..2040
DNA (546bp) protein (182aa)
Transcriptional regulator, MarR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN93_PSEUX
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEA27117.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_1947_4
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2114..2554
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEAFF
Uncharacterized protein {ECO:0000313|EMBL:CCH69348.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
signal transduction protein
scnpilot_cont_500_p_scaffold_1947_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2845..5043
DNA (2199bp) protein (733aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AEA28749.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEA28749.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pse
Peptidoglycan glycosyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXU3_PSEUX
scnpilot_cont_500_p_scaffold_1947_6
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5084..5590)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. AA4 RepID=D9VDF6_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFL10020.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
nitroreductase
scnpilot_cont_500_p_scaffold_1947_7
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5632..6372)
DNA (741bp) protein (247aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9VDF7_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL10021.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
putative transcriptional regulator, TetR family
scnpilot_cont_500_p_scaffold_1947_8
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6556..7116
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium sp. (strain JLS) RepID=A3Q6W4_MYCSJ
Uncharacterized protein {ECO:0000313|EMBL:KEI43477.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula
hypothetical protein
scnpilot_cont_500_p_scaffold_1947_9
unknown

Not on your lists

7333..7578
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1947_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7651..8382)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6I0_NAKMY rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78835.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700
scnpilot_cont_500_p_scaffold_1947_11
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8709..9158)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S5F0_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB75230.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (s
scnpilot_cont_500_p_scaffold_1947_12
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9343..10026
DNA (684bp) protein (228aa)
haloacid dehalogenase (EC:3.8.1.2)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PTH1_9ACTO
2-haloalkanoic acid dehalogenase {ECO:0000313|EMBL:GAD52122.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52
scnpilot_cont_500_p_scaffold_1947_13
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

10137..11099
DNA (963bp) protein (321aa)
Putative transporter component n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J2N5_MARPK
transporter component
Putative transporter component {ECO:0000313|EMBL:AEX84479.1}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 /
scnpilot_cont_500_p_scaffold_1947_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11212..12375
DNA (1164bp) protein (388aa)
FAD dependent oxidoreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D068_PSEUX rbh
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEA25724.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
scnpilot_cont_500_p_scaffold_1947_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12391..13005
DNA (615bp) protein (205aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D069_PSEUX rbh
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA25725.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1947_16
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13154..13567)
DNA (414bp) protein (138aa)
Protein-tyrosine-phosphatase n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XDN4_9PSEU
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:EHR61355.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea
hypothetical protein
scnpilot_cont_500_p_scaffold_1947_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13635..14729)
DNA (1095bp) protein (365aa)
arsenic transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED52
arsenical-resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:AEA24612.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
scnpilot_cont_500_p_scaffold_1947_18
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14726..15103)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003619828
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AEK39267.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis medit
scnpilot_cont_500_p_scaffold_1947_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15174..15938
DNA (765bp) protein (255aa)
glyoxalase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED50
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA23170.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseu
Displaying 19 items

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