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scnpilot_cont_500_p_scaffold_5906

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_5906_1
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..376)
DNA (375bp) protein (125aa)
adhc1; NADP-dependent alcohol dehydrogenase C 1 (EC:1.1.1.2)
Mycothiol-dependent formaldehyde dehydrogenase n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9XBG7_STRVR
Mycothiol-dependent formaldehyde dehydrogenase {ECO:0000313|EMBL:EFL34508.1}; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
scnpilot_cont_500_p_scaffold_5906_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(507..1295)
DNA (789bp) protein (263aa)
Luciferase-like, subgroup n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT79_PSEUX rbh
luciferase-like protein
Luciferase-like, subgroup {ECO:0000313|EMBL:AEA26297.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
scnpilot_cont_500_p_scaffold_5906_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1332..2069
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0Z0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25842.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_5906_4
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2073..3035)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF62 rbh
Uncharacterized protein {ECO:0000313|EMBL:EMD27585.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;
Conserved putative membrane protein
scnpilot_cont_500_p_scaffold_5906_5
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3500..4558
DNA (1059bp) protein (353aa)
High-affinity nickel transport protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LH56_9ACTO rbh
high-affinity nickel transport protein
High-affinity nickel transport protein {ECO:0000313|EMBL:AGL17748.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N9
scnpilot_cont_500_p_scaffold_5906_6
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4577..5332)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Corynebacterium ulceribovis RepID=UPI00037D93B4
RNA polymerase sigma factor SigD {ECO:0000313|EMBL:EGD23183.1}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 33707.;"
SigD; RNA Sigma factor, sigma 70 type, group 4 (ECF)
scnpilot_cont_500_p_scaffold_5906_7
unknown

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comp(5275..5583)
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_5906_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5739..6422)
DNA (684bp) protein (228aa)
DSBA oxidoreductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE9B
Protein-disulfide isomerase {ECO:0000313|EMBL:EXG80143.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712
DSBA oxidoreductase
scnpilot_cont_500_p_scaffold_5906_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6422..6970)
DNA (549bp) protein (183aa)
DoxX family protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YA28_THEBD
Putative membrane protein {ECO:0000313|EMBL:EXG80144.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;
DoxX family protein
scnpilot_cont_500_p_scaffold_5906_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6970..7668)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1Q7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27967.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_5906_11
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7716..8276
DNA (561bp) protein (187aa)
RNA polymerase sigma factor SigC n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003684697
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EWM63832.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonos
ECF subfamily RNA polymerase sigma-24 subunit
Displaying 11 items

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