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scnpilot_cont_500_p_scaffold_2050

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2050_1
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..242
DNA (240bp) protein (80aa)
Regulatory protein MarR n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B0S4_FRADG
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEH10716.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
scnpilot_cont_500_p_scaffold_2050_2
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

243..1907
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0REZ3_FRAAA rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:KJE22430.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2050_3
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2033..2383
DNA (351bp) protein (117aa)
Acetyltransferase, including N-acetylase of ribosomal protein {ECO:0000313|EMBL:CAM04428.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;"
scnpilot_cont_500_p_scaffold_2050_4
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2310..2657)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5XB55_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR53785.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU1
hypothetical protein
scnpilot_cont_500_p_scaffold_2050_5
Mycobacterium chelonae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2654..3364)
DNA (711bp) protein (237aa)
alpha/beta family hydrolase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEAFA
Alpha/beta hydrolase {ECO:0000313|EMBL:AKC39814.1}; TaxID=1774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chelonae.;"
alpha/beta hydrolase fold family protein
scnpilot_cont_500_p_scaffold_2050_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3364..4218)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWI5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28677.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_2050_7
Streptomyces sp. NTK 937, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4243..4689)
DNA (447bp) protein (149aa)
N-acetyltransferase GCN5 n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3C1Z3_9ACTO
GCN5 family acetyltransferase {ECO:0000313|EMBL:KDQ67273.1}; TaxID=1487711 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.;"
N-acetyltransferase GCN5
scnpilot_cont_500_p_scaffold_2050_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4850..7033)
DNA (2184bp) protein (728aa)
Heat shock protein 70 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWI7_PSEUX rbh
molecular chaperone DnaK
Heat shock protein 70 {ECO:0000313|EMBL:AEA28679.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (stra
scnpilot_cont_500_p_scaffold_2050_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7324..8262
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE80C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28680.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2050_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8443..9354
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWI8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28680.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2050_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9662..10570
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWI9_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28681.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2050_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10694..12541
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWJ0_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28682.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2050_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12538..14007
DNA (1470bp) protein (490aa)
GTP-binding protein HSR1-related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWJ1_PSEUX rbh
GTP-binding protein HSR1-like protein
GTP-binding protein HSR1-related protein {ECO:0000313|EMBL:AEA28683.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
scnpilot_cont_500_p_scaffold_2050_14
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

14028..14408
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000366466F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP13521.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
scnpilot_cont_500_p_scaffold_2050_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14540..17185)
DNA (2646bp) protein (882aa)
Regulatory protein LuxR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWJ4_PSEUX rbh
LuxR family transcriptional regulator
Regulatory protein LuxR {ECO:0000313|EMBL:AEA28686.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2050_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17309..18352)
DNA (1044bp) protein (348aa)
N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWJ5_PSEUX rbh
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase family 2 {ECO:0000313|EMBL:AEA28687.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" s
scnpilot_cont_500_p_scaffold_2050_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18538..20370
DNA (1833bp) protein (611aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWJ6_PSEUX rbh
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AEA28688.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudon
scnpilot_cont_500_p_scaffold_2050_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20378..20803)
DNA (426bp) protein (142aa)
CBS domain containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWJ7_PSEUX
CBS domain-containing protein
CBS domain containing protein {ECO:0000313|EMBL:AEA28689.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_2050_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20876..23158)
DNA (2283bp) protein (761aa)
VanW family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWJ8_PSEUX rbh
von Willebrand factor A
VanW family protein {ECO:0000313|EMBL:AEA28690.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_2050_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23207..23455)
DNA (249bp) protein (83aa)
10 kDa chaperonin n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWJ9_PSEUX
chaperonin Cpn10
10 kDa chaperonin {ECO:0000256|RuleBase:RU000535}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_2050_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23676..24866)
DNA (1191bp) protein (397aa)
ATPase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDEA7 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28692.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2050_22
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24987..25841)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000377CDF5
Uncharacterized protein {ECO:0000313|EMBL:EOD63224.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM
hypothetical protein
scnpilot_cont_500_p_scaffold_2050_23
unknown

Not on your lists

26071..26448
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2050_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26400..26876)
DNA (477bp) protein (159aa)
FxsA cytoplasmic membrane protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWK3_PSEUX
FxsA cytoplasmic membrane protein
FxsA cytoplasmic membrane protein {ECO:0000313|EMBL:AEA28695.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
scnpilot_cont_500_p_scaffold_2050_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26931..28451)
DNA (1521bp) protein (507aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
Dihydrolipoyllysine-residue acetyltransferase {ECO:0000313|EMBL:AEA28696.1}; EC=2.3.1.12 {ECO:0000313|EMBL:AEA28696.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocard
Dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWK4_PSEUX rbh
scnpilot_cont_500_p_scaffold_2050_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28457..29431)
DNA (975bp) protein (325aa)
pyruvate dehydrogenase (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:AEA28697.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AEA28697.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWK5_PSEUX rbh
scnpilot_cont_500_p_scaffold_2050_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29433..30620)
DNA (1188bp) protein (396aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit {ECO:0000313|EMBL:AEA28698.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AEA28698.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseud
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWK6_PSEUX rbh
scnpilot_cont_500_p_scaffold_2050_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30784..31104)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE74D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28699.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2050_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31396..32184
DNA (789bp) protein (263aa)
ABC-type transporter, periplasmic subunit family 3 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWK8_PSEUX rbh
ABC transporter substrate-binding protein
ABC-type transporter, periplasmic subunit family 3 {ECO:0000313|EMBL:AEA28700.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocard
scnpilot_cont_500_p_scaffold_2050_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32186..33103
DNA (918bp) protein (306aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWK9_PSEUX rbh
polar amino acid ABC transporter permease
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AEA28701.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source=
Displaying items 1-30 of 38 in total

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